PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3fiuD_

Fold library id	PDB Header	Molecule	Title
c3fiuD_	PDB header: ligase	Chain: D: PDB Molecule: nh(3)-dependent nad(+) synthetase;	PDBTitle: structure of nmn synthetase from francisella tularensis

Links to external resources
Added to library: Tue Mar 16 13:03:48 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D F S P K E Y S Q K L V N W L S D S C M N Y P A E G F V I G L S G G I D S A V A A S L A V K T G L P T T A L I L P S D N N Q H Q D M Q D A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
S S T
S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E L I E M L N I E H Y T I S I Q P A Y E A F L A S T Q S F T Q L V I K G N A Q A R L R M M Y L Y A Y A Q Q Y N R I V I G T D N A C E W Y M G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T G G G
T T B
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y F T K F G D G A A D I L P L V N L K K S Q V F E L G K Y L D V P K N I L D K A P S A G L W Q G Q T D E D E M G V T Y Q E I D D F L D G K Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T T T
S B
T T T T
T T
S
S S T T
T S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . .

Sequence V S A K A L E R I N F W H N R S H H K R K L A L T P N F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	F	S	P	K	E	Y	S	Q	K	L	V	N	W	L	S	D	S	C	M	N	Y	P	A	E	G	F	V	I	G	L	S	G	G	I	D	S	A	V	A	A	S	L	A	V	K	T	G	L	P	T	T	A	L	I	L	P	S	D	N	N	Q	H	Q	D	M	Q	D	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T		S								S	S													T		S										T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	L	I	E	M	L	N	I	E	H	Y	T	I	S	I	Q	P	A	Y	E	A	F	L	A	S	T	Q	S	F	T	Q	L	V	I	K	G	N	A	Q	A	R	L	R	M	M	Y	L	Y	A	Y	A	Q	Q	Y	N	R	I	V	I	G	T	D	N	A	C	E	W	Y	M	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T																			T	G	G	G																									T	T				B											T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	F	T	K	F	G	D	G	A	A	D	I	L	P	L	V	N	L	K	K	S	Q	V	F	E	L	G	K	Y	L	D	V	P	K	N	I	L	D	K	A	P	S	A	G	L	W	Q	G	Q	T	D	E	D	E	M	G	V	T	Y	Q	E	I	D	D	F	L	D	G	K	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		T	T	T	T	T			S	B		T	T	T	T													T	T								S						S	S	T	T								T	S										T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Sequence	V	S	A	K	A	L	E	R	I	N	F	W	H	N	R	S	H	H	K	R	K	L	A	L	T	P	N	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T					S