Fold library entry viewer: c3fimB_

Added to library: Sat Aug 28 21:54:07 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	F	D	Y	V	V	V	G	A	G	N	A	G	N	V	V	A	A	R	L	T	E	D	P	D	V	S	V	L	V	L	E	A	G	V	S	D	E	N	V	L	G	A	E	A	P	L	L	A	P	G	L	V	P	N	S	I	F	D	W	N	Y	T	T	T	A	Q	A	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S			S	T	T									T	T	S	T	T								S	S	B			T	T		G	G	G	T	S	G	G	G	S	G	G	G	S	S	S	S	T	T	B				B					G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	G	R	S	I	A	Y	P	R	G	R	M	L	G	G	S	S	S	V	H	Y	M	V	M	M	R	G	S	T	E	D	F	D	R	Y	A	A	V	T	G	D	E	G	W	N	W	D	N	I	Q	Q	F	V	R	K	N	E	M	V	V	P	P	A	D	N	H	N	T	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T				B				B		B	T	T	G	G	G	G	T	S			B																	T		T	T	S	S																		T	T					T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	F	I	P	A	V	H	G	T	N	G	S	V	S	I	S	L	P	G	F	P	T	P	L	D	D	R	V	L	A	T	T	Q	E	Q	S	E	E	F	F	F	N	P	D	M	G	T	G	H	P	L	G	I	S	W	S	I	A	S	V	G	N	G	Q	R	S	S	S	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S		G	G	G	S		B	S	S	S				B	S		S	S			T												T						B		S		G	G	G	S										B	S			T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	Y	L	R	P	A	Q	S	R	P	N	L	S	V	L	I	N	A	Q	V	T	K	L	V	N	S	G	T	T	N	G	L	P	A	F	R	C	V	E	Y	A	E	Q	E	G	A	P	T	T	T	V	C	A	K	K	E	V	V	L	S	A	G	S	V	G	T	P	I	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T					T	T		T	T					S	S													T	T											S	S	T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	L	S	G	I	G	D	E	N	D	L	S	S	V	G	I	D	T	I	V	N	N	P	S	V	G	R	N	L	S	D	H	L	L	L	P	A	A	F	F	V	N	S	N	Q	T	F	D	N	I	F	R	D	S	S	E	F	N	V	D	L	D	Q	W	T	N	T	R	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T										T	T				S				T	T	T	T		S	B	B												S		S		S	S	G	G	G	G	T																S		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	L	T	A	L	I	A	N	H	L	A	W	L	R	L	P	S	N	S	S	I	F	Q	T	F	P	D	P	A	A	G	P	N	S	A	H	W	E	T	I	F	S	N	Q	W	F	H	P	A	I	P	R	P	D	T	G	S	F	M	S	V	T	N	A	L	I	S	P	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G			S		S									T	T		G	G	G	G	T	S				S	S	S	T	T	S		S							S	S				T	T	S				S	S											S	S		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	G	D	I	K	L	A	T	S	N	P	F	D	K	P	L	I	N	P	Q	Y	L	S	T	E	F	D	I	F	T	M	I	Q	A	V	K	S	N	L	R	F	L	S	G	Q	A	W	A	D	F	V	I	R	P	F	D	P	R	L	R	D	P	T	D	D	A	A	I	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B					S	S	S		T	T	S								T	T		S																			T	S	G	G	G	T	T	T					S	S	G	G	G	S		T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Y	I	R	D	N	A	N	T	I	F	H	P	V	G	T	A	S	M	S	P	R	G	A	S	W	G	V	V	D	P	D	L	K	V	K	G	V	D	G	L	R	I	V	D	G	S	I	L	P	F	A	P	N	A	H	T	Q	G	P	I	Y	L	V	G	K	Q	G	A	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S			B		T	T		B			T	T		S	S		S	B		T	T		B	B	T	T		B	S					S	G	G	G			S			S	S		T
	.	.	.	.	.
Sequence	I	K	A	D	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T

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PDB structure

FASTA sequence

Hidden Markov model

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