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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3fi9B_

Fold library idPDB HeaderMoleculeTitle
c3fi9B_PDB header: oxidoreductaseChain: B: PDB Molecule: malate dehydrogenase;PDBTitle: crystal structure of malate dehydrogenase from2 porphyromonas gingivalis


Added to library: Tue Mar 16 13:57:35 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LSYLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKE
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Known secondary structure (DSSP)


S
SSSTTSTT

S

S


TT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ALTDAKYIVSSGGTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPADITGLVTLIYSGLKPSQVTT
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Known secondary structure (DSSP) TT




TT


SSST

GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence LAGLDSTRLQSELAKHFGIKQSLVTNTRTYGGHGEQMAVFASTAKVNGTPLTDLIGTDKLTNEQWAELKQ
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Known secondary structure (DSSP)

TS
GGG


SSGGG
GGG
TTGGGTTTBTTB
 .........220.........230.........240.........250.........260.........270.........280
Sequence RVVKGGANIIKLRGRSSFQSPSYVSIEMIRAAMGGEAFRWPAGCYVNVPGFEHIMMAMETTITKDGVKHS
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Known secondary structure (DSSP) TSS


TTSS
B
S
TTSTT
 .........290.........300.........310.........320
Sequence DINQLGNEAERAALKESYSHLAKLRDEVIAMGIIPAIADW
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Known secondary structure (DSSP)
GGGSS
TTSS

GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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