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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3fhoB_

Fold library idPDB HeaderMoleculeTitle
c3fhoB_PDB header: hydrolaseChain: B: PDB Molecule: atp-dependent rna helicase dbp5;PDBTitle: structure of s. pombe dbp5


Added to library: Wed Jan 9 18:11:41 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFALTMLSRVDASVPKPQAICLAPSRELARQIMDVV
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Known secondary structure (DSSP)


TTSSS
SS




SSTTSS
TT

S


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TEMGKYTEVKTAFKIDAQIVIGTPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQLGDQSMRIKHLLPRN
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Known secondary structure (DSSP) STTSS






S
TT
S

TT



TT

S
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TQIVLFSATFSERVEKYAERFAPNANEIRLKTEEGIKQLYMDCQSEEHKYNVLVELYGTIGQSIIFCKKK
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Known secondary structure (DSSP)
S

STSTT










SSS




B
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DTAEEIARRMTADGHTVACLTAQRDAIMDSFRVGTSKVLVTTNIDVSQVNLVVNLDDPQTYLHRIGRTGV
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Known secondary structure (DSSP) TTTTT





TTGGGSSSS








TT





TTTTS



 .........290.........300......
Sequence GVSINFVHDKKSWEEMNAIQEYFQRP
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Known secondary structure (DSSP)
TTTSSSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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