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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3fhcB_

Fold library idPDB HeaderMoleculeTitle
c3fhcB_PDB header: transport protein/hydrolaseChain: B: PDB Molecule: atp-dependent rna helicase ddx19b;PDBTitle: crystal structure of human dbp5 in complex with nup214


Added to library: Tue Mar 16 12:16:36 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGK
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Known secondary structure (DSSP)



TTS




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GGGGT

TT

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S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIV
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Known secondary structure (DSSP)

TTS
S


SSTTT
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S
 .........150.........160.........170.........180.........190.........200.........210
Sequence IGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKF
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Known secondary structure (DSSP)
S



GGG



TTSTTS
TTSS


 .........220....
Sequence AQKVVPDPNVIKLK
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Known secondary structure (DSSP) SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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