Fold library entry viewer: c3ffjA_

Added to library: Tue Mar 16 13:19:38 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	X	I	R	K	Y	R	Y	G	A	P	F	D	T	E	A	L	T	E	K	I	E	T	A	E	E	A	F	P	Y	G	E	I	S	Q	K	E	G	F	A	F	T	Y	I	X	D	E	D	D	I	V	Y	G	L	G	E	S	N	R	G	I	N	K	R	G	Y	C	Y	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S									S	S				B			S				S	S					T	T	S									T	T							S	S		S	S		S	S		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	C	T	D	D	P	I	H	T	E	D	K	R	S	L	Y	G	A	H	N	F	I	I	V	S	G	K	T	T	F	G	L	F	F	D	Y	P	S	K	L	T	F	D	I	G	Y	T	R	X	D	T	L	K	V	S	C	E	N	A	D	L	D	I	Y	V	I	E	G	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		G	G	G		S			S										S	S	S									S	S							S	S	S	S	T	T							S	S											S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	Y	D	I	V	K	Q	F	R	R	V	I	G	R	S	Y	I	P	P	K	F	A	F	G	F	G	Q	S	R	W	G	Y	T	T	K	E	D	F	R	A	V	A	K	G	Y	R	E	N	H	I	P	I	D	X	I	Y	X	D	I	D	Y	X	Q	D	F	K	D	F	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				G	G	G	G	S						T	T			S														T	T										G	G	G	S	S	T	T		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	E	K	N	F	P	D	F	P	E	F	V	K	E	X	K	D	Q	E	L	R	L	I	P	I	I	D	A	G	V	K	V	E	K	G	Y	E	V	Y	E	E	G	V	K	N	N	Y	F	C	K	R	E	D	G	S	D	F	V	A	A	V	W	P	G	D	T	H	F	P	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T		T	T										T	T	T									S						T	T										T	T		B		B		T	T	S		B						T	T						B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	X	L	N	P	E	A	R	K	W	F	G	D	K	Y	R	F	L	I	D	Q	G	I	E	G	F	W	N	D	X	N	E	P	A	I	F	Y	S	S	E	G	L	A	E	A	K	E	F	A	G	E	F	A	K	D	T	E	G	K	I	H	P	W	A	X	Q	A	K	X	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S										T	T					T	T	T								S	T	T	T			S																					S	S		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	I	V	N	S	P	E	D	Y	K	R	F	Y	H	N	V	N	G	K	K	I	R	H	D	K	V	H	N	L	F	G	Y	N	X	T	R	A	A	G	E	A	F	E	R	I	D	P	E	K	R	F	L	X	F	S	R	S	S	Y	I	G	X	H	R	Y	G	G	I	W	X	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T						T	S						T	T					G	G	G	G	G	G	G																		T	T								S	S			T	T	G	G	G	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	N	K	S	W	W	S	H	I	L	L	N	L	K	X	L	P	S	L	N	X	C	G	F	X	Y	T	G	A	D	L	G	G	F	G	D	D	T	T	R	D	L	L	L	R	F	L	A	L	G	V	F	T	P	L	X	R	D	H	A	A	E	G	T	R	E	Q	E	C	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T		T																T	T			S										T															T	T	S	S	S						S				S			S	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Q	F	E	N	I	E	D	F	R	S	V	I	N	A	R	Y	R	L	V	P	Y	L	Y	S	E	Y	X	K	A	A	L	N	D	D	X	Y	F	K	P	L	G	F	V	Y	P	D	D	K	X	A	I	R	V	E	D	Q	L	X	L	G	N	E	I	X	I	A	P	V	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S																													T	T			S									T	T		T	T	G	G	G			S					T	T	T								S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Q	N	A	R	G	R	Y	V	Y	L	P	E	E	X	K	F	I	K	F	X	P	D	G	S	I	S	E	E	V	L	E	K	G	V	H	Y	V	D	V	A	L	N	E	V	P	L	F	I	R	S	G	K	C	I	P	V	A	E	A	A	E	C	V	K	D	I	D	T	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S							S	S									T	T	S									S									T	T								T	T										S	S	G	G	G				T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
Sequence	X	Q	L	I	G	Y	E	G	S	S	Y	T	L	Y	E	D	D	G	I	H	K	D	Y	D	K	K	E	N	Y	R	V	L	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T										S	S	S			T	T		G	G	G

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PDB structure

FASTA sequence

Hidden Markov model

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