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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c3fd4B_ | PDB header: viral protein | Chain: B: PDB Molecule: glycoprotein gp42; | PDBTitle: crystal structure of epstein-barr virus gp42 protein |
Added to library: Sun Aug 29 03:24:31 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | V | K | L | P | H | W | T | P | T | L | H | T | F | Q | V | P | Q | N | Y | T | K | A | N | C | T | Y | C | N | T | R | E | Y | T | F | S | Y | K | G | C | C | F | Y | F | T | K | K | K | H | T | W | N | G | C | F | Q | A | C | A | E | L | Y | P | C | T | Y | F | Y | G | P | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | T | T | S | T | T | T | S | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | B | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | P | D | I | L | P | V | V | T | R | N | L | N | A | I | E | S | L | W | V | G | V | Y | R | V | G | E | G | N | W | T | S | L | D | G | G | T | F | K | V | Y | Q | I | F | G | S | H | C | T | Y | V | S | K | F | S | T | V | P | V | S | H | H | E | C | S | F | L | K | P | C | L |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | T | T | B | B | S | S | S | S | ![]() | ![]() | ![]() | ![]() | S | S | S | S | ![]() | ![]() | S | T | T | S | B | B | ![]() |   | . | . | . | . | . | . | . | |||||||||||||
Sequence | C | V | S | Q | R | S | N | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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