Fold library entry viewer: c3fcsA_

Added to library: Tue Mar 16 14:36:40 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	N	L	D	P	V	Q	L	T	F	Y	A	G	P	N	G	S	Q	F	G	F	S	L	D	F	H	K	D	S	H	G	R	V	A	I	V	V	G	A	P	R	T	L	G	P	S	Q	E	E	T	G	G	V	F	L	C	P	W	R	A	E	G	G	Q	C	P	S	L	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B		S	S	S								T	T	S		T	T	S								T	T										T	T		B		T	T	S	S	B		B									T	T						B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	L	R	D	E	T	R	N	V	G	S	Q	T	L	Q	T	F	K	A	R	Q	G	L	G	A	S	V	V	S	W	S	D	V	I	V	A	C	A	P	W	Q	H	W	N	V	L	E	K	T	E	E	A	E	K	T	P	V	G	S	C	F	L	A	Q	P	E	S	G	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S							T	T								T	T			B	T	S						T	T							T	T								T	T						B			B							T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	E	Y	S	P	C	R	G	N	T	L	S	R	I	Y	V	E	N	D	F	S	W	D	K	R	Y	C	E	A	G	F	S	S	V	V	T	Q	A	G	E	L	V	L	G	A	P	G	G	Y	Y	F	L	G	L	L	A	Q	A	P	V	A	D	I	F	S	S	Y	R	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T												T	T	T	T	T			T	T			B	T	S						T	T								T	T					T																	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	L	L	W	H	V	S	S	Q	S	L	S	F	D	S	S	N	P	E	Y	F	D	G	Y	W	G	Y	S	V	A	V	G	E	F	D	G	D	L	N	T	T	E	Y	V	V	G	A	P	T	W	S	W	T	L	G	A	V	E	I	L	D	S	Y	Y	Q	R	L	H	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S				T	T										G	G	G	T	T			T	T	S								S	S		S	S	S								T	T					T								T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	G	E	Q	M	A	S	Y	F	G	H	S	V	A	V	T	D	V	N	G	D	G	R	H	D	L	L	V	G	A	P	L	Y	M	E	S	R	A	D	R	K	L	A	E	V	G	R	V	Y	L	F	L	Q	P	R	G	P	H	A	L	G	A	P	S	L	L	L	T	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	T	T	S		T	T	S								S	S	S	S	S								T	T						T	T							B									S	T	T					S		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Q	L	Y	G	R	F	G	S	A	I	A	P	L	G	D	L	D	R	D	G	Y	N	D	I	A	V	A	A	P	Y	G	G	P	S	G	R	G	Q	V	L	V	F	L	G	Q	S	E	G	L	R	S	R	P	S	Q	V	L	D	S	P	F	P	T	G	S	A	F	G	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T			B	T	S								S	S		S	S	S								T	T		S	T	T	S	S										T	T				S	S		S							S		T	T			T	T	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	R	G	A	V	D	I	D	D	N	G	Y	P	D	L	I	V	G	A	Y	G	A	N	Q	V	A	V	Y	R	A	Q	P	V	V	K	A	S	V	Q	L	L	V	Q	D	S	L	N	P	A	V	K	S	C	V	L	P	Q	T	K	T	P	V	S	C	F	N	I	Q	M	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S	S	S	S								G	G	G	T							B														S		B		T	T							S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	V	G	A	T	G	H	N	I	P	Q	K	L	S	L	N	A	E	L	Q	L	D	R	Q	K	P	R	Q	G	R	R	V	L	L	L	G	S	Q	Q	A	G	T	T	L	N	L	D	L	G	G	K	H	S	P	I	C	H	T	T	M	A	F	L	R	D	E	A	D	F	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T			S	S										T	T	T	S		G	G	G		S				T	T	T		S	S									T	T		S	S													G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	K	L	S	P	I	V	L	S	L	N	V	S	L	P	P	T	E	A	G	M	A	P	A	V	V	L	H	G	D	T	H	V	Q	E	Q	T	R	I	V	L	D	C	G	E	D	D	V	C	V	P	Q	L	Q	L	T	A	S	V	T	G	S	P	L	L	V	G	A	D	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S															T	T																			B			S		T	T	T	T														S		S			T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	E	L	Q	M	D	A	A	N	E	G	E	G	A	Y	E	A	E	L	A	V	H	L	P	Q	G	A	H	Y	M	R	A	L	S	N	V	E	F	E	R	L	I	C	N	Q	K	K	E	N	E	T	R	V	V	L	C	E	L	G	N	P	M	K	K	N	A	Q	I	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S		B	T	T									T	T											-			B								S	S	S	S									T	T	B		T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	A	M	L	V	S	V	G	N	L	E	E	A	G	E	S	V	S	F	Q	L	Q	I	R	S	K	N	S	Q	N	P	N	S	K	I	V	L	L	D	V	P	V	R	A	E	A	Q	V	E	L	R	G	N	S	F	P	A	S	L	V	V	A	A	S	W	G	P	K	V	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T			S													S	S	S		S																								S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	T	Y	E	L	H	N	N	G	P	G	T	V	N	G	L	H	L	S	I	H	L	P	G	Q	S	Q	P	S	D	L	L	Y	I	L	D	I	Q	P	Q	G	G	L	Q	C	F	P	Q	P	P	V	N	P	L	K	V	D	W	D	P	V	L	V	S	C	D	S	A	P	C	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S													S		S		T	T	S	S										S	S							S		S			S				-							T	T	T	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	V	V	Q	C	D	L	Q	E	M	A	R	G	Q	R	A	M	V	T	V	L	A	F	L	W	L	P	S	L	Y	Q	R	P	L	D	Q	F	V	L	Q	S	H	A	W	F	N	V	S	S	L	P	Y	A	V	P	P	L	S	L	P	R	G	E	A	Q	V	W	T	Q	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T																	T	S	S	T	T																	S	S	S				S
	.	.	.
Sequence	R	A	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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