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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3fbyC_

Fold library idPDB HeaderMoleculeTitle
c3fbyC_PDB header: cell adhesionChain: C: PDB Molecule: cartilage oligomeric matrix protein;PDBTitle: the crystal structure of the signature domain of cartilage2 oligomeric matrix protein.


Added to library: Sun Aug 29 06:46:46 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NSAQRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAGNGILCGRDTDLDGFPDEKLRCPERQCRKDNC
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Known secondary structure (DSSP)




B
TTSSB

S
TT
TTS

TTSSSS
TTSSSS
SS

SSSSGGGS

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VTVPNSGQEDVDRDGIGDACDPDADGDGVPNEKDNCPLVRNPDQRNTDEDKWGDACDNCRSQKNDDQKDT
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Known secondary structure (DSSP) SSS

TT


TT
SSS
GGG
TTTT
SSS
GGG
SSTTS

TT


TT
SSS
GGG
TTTTS

TT


T
 .........150.........160.........170.........180.........190.........200.........210
Sequence DQDGRGDACDDDIDGDRIRNQADNCPRVPNSDQKDSDGDGIGDACDNCPQKSNPDQADVDHDFVGDACDS
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Known secondary structure (DSSP) T
SSS
TTT
SSTT
SSS
GGG
S
SSS

TT


TT
SSS
GGG
SSSSS

TT


TTTSSS
TTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence DQDQDGDGHQDSRDNCPTVPNSAQEDSDHDGQGDACDDDDDNDGVPDSRDNCRLVPNPGQEDADRDGVGD
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Known secondary structure (DSSP)


TT
SSS
GGG
SSTTS

TT


TT
SSS
GGG
S
SS
SSS
GGG
SSSSS

SS


TTSSSS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence VCQDDFDADKVVDKIDVCPENAEVTLTDFRAFQTVVLDPEGDAQIDPNWVVLNQGREIVQTMNSDPGLAV
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Known secondary structure (DSSP) TTSS
TT
SSS
TTT
SSTT
SS

S


SSS
TT
SS




TTTT
S

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence GYTAFNGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKS
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Known secondary structure (DSSP) SS

SS


TTSS

S


SS


SS

 .........430.........440.........450.........460.........470.........480.........490
Sequence STGPGEQLRNALWHTGDTESQVRLLWKDPRNVGWKDKKSYRWFLQHRPQVGYIRVRFYEGPELVADSNVV
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Known secondary structure (DSSP) SS
TTSSS
BTTT
TT




TT
TTTTTT


 .........500.........510.........520.........530.....
Sequence LDTTMRGGRLGVFCFSQENIIWANLRYRCNDTIPEDYETHQLRQA
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Known secondary structure (DSSP)

S
SSS




S

TGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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