Fold library entry viewer: c3faxA_

Added to library: Sat Aug 28 19:00:31 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	Q	L	K	D	A	Q	Q	T	D	L	T	S	I	Q	A	S	F	T	T	L	D	G	V	D	K	T	E	I	L	K	E	L	K	V	T	D	K	Q	N	A	I	Q	I	S	D	I	T	L	D	T	S	K	S	L	L	I	I	K	G	D	F	N	P	K	Q	G	H	F	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T							S			T	T																												T	T	T	T										T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	S	Y	N	N	N	V	T	T	R	Q	S	W	E	F	K	D	Q	L	Y	A	Y	S	G	N	L	G	A	V	L	N	Q	D	G	S	K	V	E	A	S	L	W	S	P	S	A	D	S	V	T	M	I	I	Y	D	K	D	N	Q	N	R	V	V	A	T	T	P	L	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								S								T	T	S	S									T	T		S									T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	N	K	G	V	W	Q	T	I	L	D	T	K	L	G	I	K	N	Y	T	G	Y	Y	Y	L	Y	E	I	K	R	G	D	K	V	K	I	L	D	P	Y	A	K	S	L	A	E	W	D	S	N	T	V	N	D	D	I	K	T	A	K	A	A	F	V	N	P	S	Q	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S								G	G	G	T		S			T	T																		T	T		S		B				B	G	G	G			S	S			S								G	G	G	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	Q	N	L	S	F	A	K	I	A	N	F	K	G	R	Q	D	A	V	I	Y	E	A	H	V	R	D	F	T	S	D	Q	S	L	D	G	K	N	Q	L	G	T	F	A	A	F	S	E	K	L	D	Y	L	Q	K	L	G	V	T	H	I	Q	L	L	P	V	L	S	Y	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T							T	T			S	G	G	G															G	G	G						T	T	S							T								T		S					S			B		B	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	V	N	E	M	D	K	S	R	S	T	A	Y	T	S	S	D	N	N	Y	N	W	G	Y	D	P	Q	S	Y	F	A	L	S	G	M	Y	S	E	K	P	K	D	P	S	A	R	I	A	E	L	K	Q	L	I	H	D	I	H	K	R	G	M	G	V	I	L	D	V	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		B	T	T							S			S	S	S		S				S		S	B	S		S	S	S	B		G	G	G		S		T	T	S																		T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	H	T	A	K	T	Y	L	F	E	D	I	E	P	N	Y	Y	H	F	M	N	E	D	G	S	P	R	E	S	F	G	G	G	R	L	G	T	T	H	A	M	S	R	R	V	L	V	D	S	I	K	Y	L	T	S	E	F	K	V	D	G	F	R	F	D	M	M	G	D	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			S		T					T	T	S	T	T	T	S	B		B		T	T	S		B		B	S	S	S	S	B		B		T	T	S																		S								T	T	G	G	G	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	A	A	A	I	E	L	A	Y	K	E	A	K	A	I	N	P	N	M	I	M	I	G	E	G	W	R	T	F	Q	G	D	Q	G	K	P	V	K	P	A	D	Q	D	W	M	K	S	T	D	T	V	G	V	F	S	D	D	I	R	N	S	L	K	S	G	F	P	N	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B																T	T									S					B	T	T	B				B	S	S	G	G	G	G	G	G		S	S																T	T	S	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	P	A	F	I	T	G	G	P	Q	S	L	Q	G	I	F	K	N	I	K	A	Q	P	G	N	F	E	A	D	S	P	G	D	V	V	Q	Y	I	A	A	H	D	N	L	T	L	H	D	V	I	A	K	S	I	N	K	D	P	K	V	A	E	E	D	I	H	R	R	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T													T	T			T	T	S			S	S	G	G	G					S			S	S	S	S											T			T	T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	G	N	V	M	I	L	T	S	Q	G	T	A	F	I	H	S	G	Q	E	Y	G	R	T	K	R	L	L	N	P	D	Y	M	T	K	V	S	D	K	L	P	N	K	A	T	L	I	E	A	V	K	E	Y	P	Y	F	I	H	D	S	Y	D	S	S	D	A	I	N	H	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	S	S	S						T	T	T	T	T	T				B				G	G	G	S	S								T	T					S	S			S	S					S		G	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	D	W	A	A	A	T	D	N	N	K	H	P	I	S	T	K	T	Q	A	Y	T	A	G	L	I	T	L	R	R	S	T	D	A	F	R	K	L	S	K	A	E	I	D	R	E	V	S	L	I	T	E	V	G	Q	G	D	I	K	E	K	D	L	V	I	A	Y	Q	T	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T																				T		T	T	S	S														S	S		T	T	S	T	T			S			S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	S	G	D	I	Y	A	V	F	V	N	A	D	S	K	A	R	N	V	L	L	G	E	K	Y	K	H	L	L	K	G	Q	V	I	V	D	A	D	Q	A	G	I	K	P	I	S	T	P	R	G	V	H	F	E	K	D	S	L	L	I	D	P	L	T	A	I	V	I	K	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S	S											G	G	G	G	G	S						S	S		B	S	S	S			S	S		S	S					S	S						T	T
	.
Sequence	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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