PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3f84A_

Fold library id	PDB Header	Molecule	Title
c3f84A_	PDB header: cell adhesion	Chain: A: PDB Molecule: cfa/i fimbrial subunit b;	PDBTitle: structure of fusion complex of major pilin cfab and major2 pilin cfab of cfa/i pilus from etec e. coli

Links to external resources
Added to library: Sat Aug 28 15:53:34 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M I D L L Q A D G N A L P S A V K L A Y S P A S K T F E S Y R V M T Q V H T N D A T K K V I V K L A D T P Q L T D V L N S T V Q M P I S V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S
T T T T
S
S S S
S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence W G G Q V L S T T A K E F E A A A L G Y S A S G V N G V S S S Q E L V I S A A P K T A G T A P T A G N Y S G V V S L V M T L G S D N K Q V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
B
S S S T T B
S S T T S
S S S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K N I T V T A S V D P V I E L L Q A D G N A L P S A V K L A Y S P A S K T F E S Y R V M T Q V H T N D A T K K V I V K L A D T P Q L T D V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S
T T T T
S
T T S
S S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence N S T V Q M P I S V S W G G Q V L S T T A K E F E A A A L G Y S A S G V N G V S S S Q E L V I S A A P K T A G T A P T A G N Y S G V V S L V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
G G G G T
S S S S T T B
S S T T
S

. . . . . . . . . 290 . . . . . . . . . 300 . .

Sequence M T L G S D N K Q V E K N I T V T A S V D P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	I	D	L	L	Q	A	D	G	N	A	L	P	S	A	V	K	L	A	Y	S	P	A	S	K	T	F	E	S	Y	R	V	M	T	Q	V	H	T	N	D	A	T	K	K	V	I	V	K	L	A	D	T	P	Q	L	T	D	V	L	N	S	T	V	Q	M	P	I	S	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S					S								T	T	T	T														S		S	S	S							S	S							T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	W	G	G	Q	V	L	S	T	T	A	K	E	F	E	A	A	A	L	G	Y	S	A	S	G	V	N	G	V	S	S	S	Q	E	L	V	I	S	A	A	P	K	T	A	G	T	A	P	T	A	G	N	Y	S	G	V	V	S	L	V	M	T	L	G	S	D	N	K	Q	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T					S	S												B		S	S	S	T	T	B													S	S	T	T	S				S														S	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	N	I	T	V	T	A	S	V	D	P	V	I	E	L	L	Q	A	D	G	N	A	L	P	S	A	V	K	L	A	Y	S	P	A	S	K	T	F	E	S	Y	R	V	M	T	Q	V	H	T	N	D	A	T	K	K	V	I	V	K	L	A	D	T	P	Q	L	T	D	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T	S					S								T	T	T	T														S		T	T	S							S	S							T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	S	T	V	Q	M	P	I	S	V	S	W	G	G	Q	V	L	S	T	T	A	K	E	F	E	A	A	A	L	G	Y	S	A	S	G	V	N	G	V	S	S	S	Q	E	L	V	I	S	A	A	P	K	T	A	G	T	A	P	T	A	G	N	Y	S	G	V	V	S	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T					S	S						G	G	G	G	T			S	S	S	S	T	T	B													S	S	T	T					S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Sequence	M	T	L	G	S	D	N	K	Q	V	E	K	N	I	T	V	T	A	S	V	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T