PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3f56F_

Fold library id	PDB Header	Molecule	Title
c3f56F_	PDB header: structural protein	Chain: F: PDB Molecule: csos1d;	PDBTitle: the structure of a previously undetected carboxysome shell2 protein: csos1d from prochlorococcus marinus med4

Links to external resources
Added to library: Sat Aug 28 16:47:58 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q I E L R T Y V F L D S L Q P Q L A A Y X G T V S R G F L P I P G D S C L W X E V S P G X A V H R V T D I A L K A S N V R L G Q X I V E R A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S
T T
S G G G S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F G S L A L Y H K D Q S T V L H S G D V V L D A I G S E V R K R T K P S T S W T E V I C A I T P D H A V L I N R Q N R S G S X I Q S G X S X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
G G G S
S
S S
S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . .

Sequence F I L E T E P A G Y V L K A A N E A E K S A N I T I I D V K A V G A F G R L T L A G K E G D V E E A A A A A I R A I D Q I S N Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T S
S S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	I	E	L	R	T	Y	V	F	L	D	S	L	Q	P	Q	L	A	A	Y	X	G	T	V	S	R	G	F	L	P	I	P	G	D	S	C	L	W	X	E	V	S	P	G	X	A	V	H	R	V	T	D	I	A	L	K	A	S	N	V	R	L	G	Q	X	I	V	E	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S														S	S	S				T	T										S	G	G	G												S	S										S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	G	S	L	A	L	Y	H	K	D	Q	S	T	V	L	H	S	G	D	V	V	L	D	A	I	G	S	E	V	R	K	R	T	K	P	S	T	S	W	T	E	V	I	C	A	I	T	P	D	H	A	V	L	I	N	R	Q	N	R	S	G	S	X	I	Q	S	G	X	S	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S																T	T			G	G	G	S													S												S	S			S					T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Sequence	F	I	L	E	T	E	P	A	G	Y	V	L	K	A	A	N	E	A	E	K	S	A	N	I	T	I	I	D	V	K	A	V	G	A	F	G	R	L	T	L	A	G	K	E	G	D	V	E	E	A	A	A	A	A	I	R	A	I	D	Q	I	S	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	T	T												S										S	S	S	S