Fold library entry viewer: c3f41B_

Added to library: Sat Aug 28 22:44:08 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	A	V	V	K	N	P	P	K	L	A	L	K	I	D	R	A	D	V	N	Q	L	P	R	N	F	R	M	G	S	D	K	Y	V	G	V	T	K	T	G	I	M	P	T	R	K	G	M	D	T	M	N	V	S	A	S	S	C	F	S	E	K	E	L	E	A	I	L	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B		S	S			S	S										S	S			T	T				T	T					S			T	T	S						T	T	S	T	T							S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	P	V	K	P	S	Q	F	Y	D	V	D	L	R	G	E	S	H	G	Y	L	N	G	T	A	V	S	W	F	A	N	H	D	W	G	N	D	G	R	T	E	D	I	I	I	P	L	E	K	E	Q	L	A	S	L	K	G	S	T	V	K	S	I	Y	R	F	D	D	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S		G	G	G									S						T	T								G	G	G		T	T	T	T																T	T	T	T											T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	V	I	L	S	P	V	Y	V	N	Y	N	K	V	R	T	E	E	E	M	V	K	Q	H	G	A	N	Y	F	R	L	T	L	Q	D	H	F	R	P	D	D	P	D	V	D	K	F	L	E	F	Y	K	S	L	P	K	D	A	W	L	H	Y	H	C	Y	A	G	M	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T											S											T	T	T										T	T	S																T	S		T	T								S	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	T	I	F	M	V	M	H	D	I	L	K	N	A	K	D	V	S	F	D	D	I	I	Q	R	Q	K	L	I	G	I	V	D	L	S	E	I	P	D	K	K	K	N	Y	G	R	K	A	Y	I	E	R	Y	Q	F	V	Q	H	F	Y	D	Y	V	K	E	N	P	D	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	T	S													S	S			T	T				T	T																											T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	P	Y	S	V	W	A	K	K	N	K	V	N	S	W	E	P	D	Y	N	G	Y	I	W	R	L	D	T	K	D	R	N	Q	L	P	R	N	F	R	T	M	N	S	A	F	R	T	D	V	N	V	K	K	T	G	K	G	F	T	P	T	P	T	R	K	G	L	D	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									T	T																					S	S			T	T				T	T	S				S	S			G	G	G			T	T			S	S				T	T		T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Y	M	S	G	S	A	E	F	S	N	G	E	L	Q	A	M	L	P	V	L	K	Q	Q	A	K	G	P	I	Y	I	M	D	L	R	Q	E	T	H	G	V	F	N	G	N	A	V	S	W	Y	G	L	R	D	W	G	N	L	G	K	N	K	A	E	V	L	K	D	E	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S																			S	S										S						T	T								G	G	G		T	T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	L	N	A	A	R	G	K	S	L	I	V	A	E	L	D	K	D	K	M	P	I	D	P	K	P	V	K	I	E	S	V	M	T	E	Q	Q	L	V	E	K	N	G	L	H	Y	Y	R	I	A	A	T	D	H	I	W	P	S	A	A	N	I	D	E	F	I	N	F	T	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	S	S								B		T	T	S		B	S	S																			T	T										T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	M	P	A	N	A	W	L	H	F	H	C	Q	A	G	A	G	R	T	T	A	Y	M	A	M	Y	D	M	M	K	N	P	D	V	S	L	G	D	I	L	S	R	Q	Y	L	L	G	G	N	Y	V	A	Y	E	I	A	K	P	K	P	D	Q	W	K	A	D	Y	Y	H	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		T	T								S	S	S	S																T	T	S												T	T	S			T	T				S	S			T	T		T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590
Sequence	K	A	H	M	I	E	K	F	Y	Q	Y	V	Q	E	N	H	A	D	G	F	K	T	S	W	S	Q	W	L	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	T	T	S		S

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PDB structure

FASTA sequence

Hidden Markov model

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