PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3f0cA_

Fold library id	PDB Header	Molecule	Title
c3f0cA_	PDB header: transcription regulator	Chain: A: PDB Molecule: transcriptional regulator;	PDBTitle: crystal structure of transcriptional regulator from2 cytophaga hutchinsonii atcc 33406

Links to external resources
Added to library: Tue Mar 16 12:26:28 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D G K L E L I I N A A Q K R F A H Y G L C K T T X N E I A S D V G X G K A S L Y Y Y F P D K E T L F E A V I K K E Q N V F F D E X D K I L N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T
S S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S G I D A T A L L K K Y V K L R S L H F R H L L N L S K L R S D F T K P V F A K A F E S F K Q K E V E I V A G I I Q Y G I T T K E F K R G N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S
T S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . .

Sequence K H E N A E F L V H L L L G V R X V K L K Y K E I N D F D E S D Y E D L D K N X C K V A G X F L K E I Q T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S
S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	G	K	L	E	L	I	I	N	A	A	Q	K	R	F	A	H	Y	G	L	C	K	T	T	X	N	E	I	A	S	D	V	G	X	G	K	A	S	L	Y	Y	Y	F	P	D	K	E	T	L	F	E	A	V	I	K	K	E	Q	N	V	F	F	D	E	X	D	K	I	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S	S	S											T											S	S																									T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	G	I	D	A	T	A	L	L	K	K	Y	V	K	L	R	S	L	H	F	R	H	L	L	N	L	S	K	L	R	S	D	F	T	K	P	V	F	A	K	A	F	E	S	F	K	Q	K	E	V	E	I	V	A	G	I	I	Q	Y	G	I	T	T	K	E	F	K	R	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																												S	S	S																																	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Sequence	K	H	E	N	A	E	F	L	V	H	L	L	L	G	V	R	X	V	K	L	K	Y	K	E	I	N	D	F	D	E	S	D	Y	E	D	L	D	K	N	X	C	K	V	A	G	X	F	L	K	E	I	Q	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							S		S	S	S			S																				T	T