PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3ez4B_

Fold library id	PDB Header	Molecule	Title
c3ez4B_	PDB header: transferase	Chain: B: PDB Molecule: 3-methyl-2-oxobutanoate hydroxymethyltransferase;	PDBTitle: crystal structure of 3-methyl-2-oxobutanoate2 hydroxymethyltransferase from burkholderia pseudomallei

Links to external resources
Added to library: Tue Mar 16 13:01:03 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M V T V P K L Q A M R E A G E K I A M L T S Y D A S F A A L L D R A N V D V Q L I G D S L G N V L Q G Q A T T L P V T L D D I A Y H T A C V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S T T
S
T T T T
S S S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A R A Q P R G L V V A D L P F G T Y G T P A D A F A S A V K L M R A G A Q M V K L E G G E W L A E T V R F L V E R A V P V C A H V G L G A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
T T S
S S T T
S
G G G T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q L L R D A R A V E E A G A Q L I V L E A V P T L V A A E V T R E L S I P T I G I G A G A E C S G Q V L V L H D M L G V F P G K R P R F V K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
S S
S S
S
S S
T T
S S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . .

Sequence D F M Q G Q P S I F A A V E A Y V R A V K D G S F P G P E H S F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T
S S T
S S
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	V	T	V	P	K	L	Q	A	M	R	E	A	G	E	K	I	A	M	L	T	S	Y	D	A	S	F	A	A	L	L	D	R	A	N	V	D	V	Q	L	I	G	D	S	L	G	N	V	L	Q	G	Q	A	T	T	L	P	V	T	L	D	D	I	A	Y	H	T	A	C	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T										S										T	T		S						T	T					T	T			S	S	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	R	A	Q	P	R	G	L	V	V	A	D	L	P	F	G	T	Y	G	T	P	A	D	A	F	A	S	A	V	K	L	M	R	A	G	A	Q	M	V	K	L	E	G	G	E	W	L	A	E	T	V	R	F	L	V	E	R	A	V	P	V	C	A	H	V	G	L	G	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T			S	S								T	T	S		S	S														T	T		S								G	G	G										T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	L	L	R	D	A	R	A	V	E	E	A	G	A	Q	L	I	V	L	E	A	V	P	T	L	V	A	A	E	V	T	R	E	L	S	I	P	T	I	G	I	G	A	G	A	E	C	S	G	Q	V	L	V	L	H	D	M	L	G	V	F	P	G	K	R	P	R	F	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T		S						S														S	S						S	S		S		S	S										T	T			S	S				T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Sequence	D	F	M	Q	G	Q	P	S	I	F	A	A	V	E	A	Y	V	R	A	V	K	D	G	S	F	P	G	P	E	H	S	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	T	T		S	S															T		S	S		G	G	G