PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3exsB_

Fold library id	PDB Header	Molecule	Title
c3exsB_	PDB header: lyase	Chain: B: PDB Molecule: rmpd (hexulose-6-phosphate synthase);	PDBTitle: crystal structure of kgpdc from streptococcus mutans in2 complex with d-r5p

Links to external resources
Added to library: Sat Aug 28 23:47:54 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q L P N L Q V A L D H S N L K G A I T A A V S V G N E V D V I E A G T V C L L Q V G S E L V E V L R S L F P D K I I V A D T K C A D A G G T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S G G G
S
T
S S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V A K N N A V R G A D W M T C I C S A T I P T M K A A R K A I E D I N P D K G E I Q V E L Y G D W T Y D Q A Q Q W L D A G I S Q A I Y H Q S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S T T S
T T T
S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R T W G E K D L N K V K K L I E M G F R V S V T G G L S V D T L K L F E G V D V F T F I A G R G I T E A K N P A G A A R A F K D E I K R I W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S S
T T T G G G G T T S
S
S S S S

.

Sequence G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	L	P	N	L	Q	V	A	L	D	H	S	N	L	K	G	A	I	T	A	A	V	S	V	G	N	E	V	D	V	I	E	A	G	T	V	C	L	L	Q	V	G	S	E	L	V	E	V	L	R	S	L	F	P	D	K	I	I	V	A	D	T	K	C	A	D	A	G	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S												G	G	G		S														T											S	S	S										S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	A	K	N	N	A	V	R	G	A	D	W	M	T	C	I	C	S	A	T	I	P	T	M	K	A	A	R	K	A	I	E	D	I	N	P	D	K	G	E	I	Q	V	E	L	Y	G	D	W	T	Y	D	Q	A	Q	Q	W	L	D	A	G	I	S	Q	A	I	Y	H	Q	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T		S						T	T	S																	T	T	T									S	S												T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	T	W	G	E	K	D	L	N	K	V	K	K	L	I	E	M	G	F	R	V	S	V	T	G	G	L	S	V	D	T	L	K	L	F	E	G	V	D	V	F	T	F	I	A	G	R	G	I	T	E	A	K	N	P	A	G	A	A	R	A	F	K	D	E	I	K	R	I	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T							S	S			T	T	T	G	G	G	G	T	T	S			S										S	S	S	S
	.
Sequence	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)