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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3eweD_

Fold library idPDB HeaderMoleculeTitle
c3eweD_PDB header: protein transport,structural proteinChain: D: PDB Molecule: nucleoporin nup85;PDBTitle: crystal structure of the nup85/seh1 complex


Added to library: Tue Mar 16 14:01:30 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MPLKFKLGPLSYQNMAFITKYKLYPVRIPRLDTSKEFSAYVSGLFEIYRDLGDKEHNATVNLAMEAILNE
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TT







TT


STT



 .........80.........90.........100.........110.........120.........130.........140
Sequence LEVFIGRVKDVNRFYELEESLTVLNCLRTMYFILNRSEFIESLLNWINRSDGEPDEEYIEQVETQYFWKL
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S


TTT


T



 .........150.........160.........170.........180.........190.........200.........210
Sequence LNQLVLRGLLSQAIGCIERSDLLCAVSFDAVSDSIELLTFREWKNLVLKLSQAFSGELRDYIEDFLLVIG
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Known secondary structure (DSSP) TT
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S
 .........220.........230.........240.........250.........260.........270.........280
Sequence GNQRKILQYSRTWYESFCGFLLYYIPSLELSAEYLQMSLEANVVDITNDWEQPCVDIISGKIHSILPVME
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Known secondary structure (DSSP) T
TTTTTTS

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STTS


SSSTTS

GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence SLDSCTAAFTAMICEAKGLFSYRNGMASYMLNSFAFELCSLGDKELWPVAIGLIATRSAKKMVIAELLPH
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SSSS
STTT

TTT

GGG
 .........360.........370.........380.........390.....
Sequence YPFVTNDDIEWMLSICVEWRLPEIAKEIYTTLGNQMLSAHNIIES
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Known secondary structure (DSSP)



ST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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