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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3etvA_

Fold library idPDB HeaderMoleculeTitle
c3etvA_PDB header: transport proteinChain: A: PDB Molecule: protein transport protein tip20,linker,proteinPDBTitle: crystal structure of a tip20p-dsl1p fusion protein


Added to library: Tue Mar 16 13:47:31 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NINDRIKQVQNERNELASKLQNLKLQREAILANELNILDNLKTFLNLIKEVKTNLNILELENCYYSLQSL
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Known secondary structure (DSSP)


TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RKKMRNNAAYLKQSFNFQQSISTYVDTLHLELVSTLYKILTNGFWKITENSIQFTPTVEWGKDKVHIEYD
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Known secondary structure (DSSP)
TS
TT
SS
STTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TFMDFVAQQYFPKGSLDNQAWFILDMTSADSQEQVRAKLNTIMKEYMNLSRIVSMIKNSIFISGKEISYE
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Known secondary structure (DSSP)
GGGS

TTST
SSTS
TT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NEKNILVFSKSCVSTVLTSFEAVCDFMLDGLAFRDRKTLSYELGPLFNTEFTKFVKNNASIILESLDSPL
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Known secondary structure (DSSP) TTTT

TS
TTSSSS
 .........290.........300.........310.....
Sequence KNLVSVINNKLTRLVAKSEVTNWTHSGKEIQDLLM
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Known secondary structure (DSSP) T
SS



ST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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