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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c3etoB_ | PDB header: signaling protein | Chain: B: PDB Molecule: neurogenic locus notch homolog protein 1; | PDBTitle: 2 angstrom xray structure of the notch1 negative regulatory2 region (nrr) |
Added to library: Tue Mar 16 12:39:49 2010 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | A | C | E | L | P | E | C | Q | E | D | A | G | N | K | V | C | S | L | Q | C | N | N | H | A | C | G | W | D | G | G | D | C | S | L | N | F | N | D | P | W | K | N | C | T | Q | S | L | Q | C | W | K | Y | F | S | D | G | H | C | D | S | Q | C | N | S | A | G | C | L | F | D |
Predicted secondary structure | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S | G | G | G | S | G | G | G | ![]() | ![]() | ![]() | ![]() | T | T | T | T | T | T | S | T | T | T | T | S | G | G | G | G | G | G | T | T | T | S | S | S | G | G | G | S | G | G | G | G | G | G |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | G | F | D | C | Q | R | A | E | G | Q | C | N | P | L | Y | D | Q | Y | C | K | D | H | F | S | D | G | H | C | D | Q | G | C | N | S | A | E | C | E | W | D | G | L | D | C | A | E | H | V | P | E | R | L | A | A | G | T | L | V | V | V | V | L | M | P | P | E | Q | L | R | N |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | G | G | T | T | S | S | S | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | S | S | S | G | G | G | S | T | T | T | G | G | G | G | G | T | T | T | T | S | B | B | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | T |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | S | S | F | H | F | L | R | E | L | S | R | V | L | H | T | N | V | V | F | K | R | D | A | H | G | Q | Q | M | I | F | P | Y | Y | G | M | D | V | R | G | S | I | V | Y | L | E | I | D | N | R | Q | C | V | Q | A | S | S | Q | C | F | Q | S | A | T | D | V | A | A | F | L | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | S | ![]() | ![]() | ![]() | ![]() | B | T | T | B | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | S | S | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . |
Sequence | A | L | A | S | L | G | S | L | N | I | P | Y | K | I | E | A | V | Q | S | E | T | V | ||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | T | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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