PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3et1A_

Fold library id	PDB Header	Molecule	Title
c3et1A_	PDB header: transcription/transferase	Chain: A: PDB Molecule: peroxisome proliferator-activated receptor alpha;	PDBTitle: structure of pparalpha with 3-[5-methoxy-1-(4-methoxy-2 benzenesulfonyl)-1h-indol-3-yl]-propionic acid

Links to external resources
Added to library: Tue Mar 16 12:55:38 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E T A D L K S L A K R I Y E A Y L K N F N M N K V K A R V I L S G K A S N N P P F V I H D M E T L C M A E K T L V A Q N K E A E V R I F H C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T T
S S
T T
S
S S
S T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence C Q C T S V E T V T E L T E F A K A I P G F A N L D L N D Q V T L L K Y G V Y E A I F A M L S S V M N K D G M L V A Y G N G F I T R E F L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T S T T S
G G G T T G G G T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S L R K P F C D I M E P K F D F A M K F N A L E L D D S D I S L F V A A I I C C G D R P G L L N V G H I E K M Q E G I V H V L R L H L Q S N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T G G G S S T T
S
T T
T T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . .

Sequence H P D D I F L F P K L L Q K M A D L R Q L V T E H A Q L V Q I I K K T E S D A A L H P L L Q E I Y R D M Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S
T T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	T	A	D	L	K	S	L	A	K	R	I	Y	E	A	Y	L	K	N	F	N	M	N	K	V	K	A	R	V	I	L	S	G	K	A	S	N	N	P	P	F	V	I	H	D	M	E	T	L	C	M	A	E	K	T	L	V	A	Q	N	K	E	A	E	V	R	I	F	H	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T	T	T														S	S										T	T		S		S	S							S									T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	C	Q	C	T	S	V	E	T	V	T	E	L	T	E	F	A	K	A	I	P	G	F	A	N	L	D	L	N	D	Q	V	T	L	L	K	Y	G	V	Y	E	A	I	F	A	M	L	S	S	V	M	N	K	D	G	M	L	V	A	Y	G	N	G	F	I	T	R	E	F	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	S	T	T	S	T	T	S																						G	G	G			T	T					G	G	G	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	L	R	K	P	F	C	D	I	M	E	P	K	F	D	F	A	M	K	F	N	A	L	E	L	D	D	S	D	I	S	L	F	V	A	A	I	I	C	C	G	D	R	P	G	L	L	N	V	G	H	I	E	K	M	Q	E	G	I	V	H	V	L	R	L	H	L	Q	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		T	T	G	G	G	S	S												T	T																S		T	T		T	T		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Sequence	H	P	D	D	I	F	L	F	P	K	L	L	Q	K	M	A	D	L	R	Q	L	V	T	E	H	A	Q	L	V	Q	I	I	K	K	T	E	S	D	A	A	L	H	P	L	L	Q	E	I	Y	R	D	M	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		T	T																													S		T	T												T	T