Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3ee1A_

Fold library idPDB HeaderMoleculeTitle
c3ee1A_PDB header: hydrolaseChain: A: PDB Molecule: effector protein vira;PDBTitle: novel fold of vira, a type iii secretion system effector2 protein from shigella flexneri


Added to library: Tue Mar 16 12:07:32 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EVASYCDRVVAAVEKKLXDSFSPSLSQDKXDGEFAHANIDGISIRLCLNKGICSVFYLDGDKIQSTQLSS
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)
TTTTTT



SGGG

STTS
TTTTTT


SSS


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence KEYNNLLSSLPPKQFNLGKVHTITAPVSGNFKTHKPAPEVIETAINCCTSIIPNDDYFPVKDTDFNSVWH
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) SS
S


SS


SS


SS
SS

S




SB



TTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence DIYRDIRASDSNSTKIYFNNIEIPLKLIADLINELGINEFIDSKKELQXLSYNQLNKIINSNFPQQDLCF
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) T

TTT
TT
T
SSS

TT






S
S

 .........220.........230.........240.........250.........260.........270.........280
Sequence QTEKLLFTSLFQDPAFISALTSAFWQSLHITSSSVEHIYAQIXSENIENRLNFXPENNCGHIIKINAVVP
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) TT
TT
TTTT

B








 .........290.........300.........310.........320.........330.........340.
Sequence GRAYEVSSSILPSHITCNGVGINKIETSYLVHAGTLPSSEGLRNAIPPESRQVSFAIISPD
Predicted secondary structure


































SS confidence




























































Known secondary structure (DSSP)




SSS
SS

SSS
GGG



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D