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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3eb8A_

Fold library idPDB HeaderMoleculeTitle
c3eb8A_PDB header: hydrolaseChain: A: PDB Molecule: cysteine protease-like vira;PDBTitle: vira


Added to library: Tue Mar 16 13:14:32 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AEKHSEKKLMDSFSPSLSQDKMDGEFAHANIDGISIRLCLNKGICSVFYLDGDKIQSTQLSSKEYNNLLS
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Known secondary structure (DSSP)
T



TT

TTTTTTTT



 .........80.........90.........100.........110.........120.........130.........140
Sequence SLPPKQFNLGKVHTITAPVSGNFKTHKPAPEVIETAINCCTSIIPNDDYFHVKDTDFNSVWHDIYRDIRA
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Known secondary structure (DSSP) S
S


SS

SS


SS
SS






SSB



TTTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SDSNSTKIYFNNIEIPLKLIADLINELGINEFIDSKKELQMLSYNQVNKIINSNFPQQDLCFQTEKLLFT
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Known secondary structure (DSSP) GGGS

TT

TT

TTS
TT










S
 .........220.........230.........240.........250.........260.........270.........280
Sequence SLFQDPAFISALTSAFWQSLHITSSSVEHIYAQIMSENIENRLNFMPEQRVINNCGHIIKINAVRAYEVS
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Known secondary structure (DSSP) TTS
TT
TTTT

B
SS



S


 .........290.........300.........310.........320.........330....
Sequence SSILPSHITCNGVGINKIETSYLVHAGTLPSSEGLRNAIPPESRQVSFAIISPD
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Known secondary structure (DSSP) TT
TT

SSS
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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