PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3earA_

Fold library id	PDB Header	Molecule	Title
c3earA_	PDB header: hydrolase	Chain: A: PDB Molecule: hera;	PDBTitle: novel dimerization motif in the dead box rna helicase hera:2 form 1, partial dimer

Links to external resources
Added to library: Tue Mar 16 13:07:22 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V T Y E E E A V P A P V R G R L E V L S D L L Y V A S P D R A M V F T R T K A E T E E I A Q G L L R L G H P A Q A L H G D L S Q G E R E R V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G
S S
S S T T
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L G A F R Q G E V R V L V A T D V A A R G L D I P Q V D L V V H Y R L P D R A E A Y Q H R S G R T G R G G R V V L L Y G P R E R R D V E A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T T T
S S
S
B S S S
S S T T B
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . .

Sequence E R A V G R R F K R V N P P T P E E V L E A K W R H L L A R L A R V P E K D Y R L Y Q D F A G R L F A E G R V E V V A A L L A L L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	T	Y	E	E	E	A	V	P	A	P	V	R	G	R	L	E	V	L	S	D	L	L	Y	V	A	S	P	D	R	A	M	V	F	T	R	T	K	A	E	T	E	E	I	A	Q	G	L	L	R	L	G	H	P	A	Q	A	L	H	G	D	L	S	Q	G	E	R	E	R	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S									G	G	G															S	S						S	S														T	T								T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	G	A	F	R	Q	G	E	V	R	V	L	V	A	T	D	V	A	A	R	G	L	D	I	P	Q	V	D	L	V	V	H	Y	R	L	P	D	R	A	E	A	Y	Q	H	R	S	G	R	T	G	R	G	G	R	V	V	L	L	Y	G	P	R	E	R	R	D	V	E	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S								T	T	T	T		S	S		S			B	S					S	S			S	S									T	T	B												G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Sequence	E	R	A	V	G	R	R	F	K	R	V	N	P	P	T	P	E	E	V	L	E	A	K	W	R	H	L	L	A	R	L	A	R	V	P	E	K	D	Y	R	L	Y	Q	D	F	A	G	R	L	F	A	E	G	R	V	E	V	V	A	A	L	L	A	L	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T																													S							T	T										T	T