PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c3eapD_

Fold library id	PDB Header	Molecule	Title
c3eapD_	PDB header: hydrolase activator	Chain: D: PDB Molecule: rho gtpase-activating protein 11a;	PDBTitle: crystal structure of the rhogap domain of arhgap11a

Links to external resources
Added to library: Tue Mar 16 13:21:56 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L Y F Q G M W D Q R L V R L A L L Q H L R A F Y G I K V G K I F G V P F N A L P H S A V P E Y G H I P S F L V D A C T S L E D H I H T S V I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S S
S T T
T T T S
T T T T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R L K A L K N K V D H G P P C D I A G L L K Q F F R E L P E P I L P A D L H E A L L K A Q Q L G T E E K N K A T L L L S C L L A D H T V H V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S S S
S S
G G G T S
T T T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L R Y F F N F L R N V S L R S S E N K M D S S N L A V I F A P N L L Q T S S N T E K K L R L Q A A V V Q T L I D Y A S D I G R V P D F I L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T
T G G G T T
T

. .

Sequence K I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	Y	F	Q	G	M	W	D	Q	R	L	V	R	L	A	L	L	Q	H	L	R	A	F	Y	G	I	K	V	G	K	I	F	G	V	P	F	N	A	L	P	H	S	A	V	P	E	Y	G	H	I	P	S	F	L	V	D	A	C	T	S	L	E	D	H	I	H	T	S	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	S	S																								S	T	T			T	T	T	S						T	T	T																T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	L	K	A	L	K	N	K	V	D	H	G	P	P	C	D	I	A	G	L	L	K	Q	F	F	R	E	L	P	E	P	I	L	P	A	D	L	H	E	A	L	L	K	A	Q	Q	L	G	T	E	E	K	N	K	A	T	L	L	L	S	C	L	L	A	D	H	T	V	H	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																											T	S	S	S		S	S		G	G	G									T	S		T	T											T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	R	Y	F	F	N	F	L	R	N	V	S	L	R	S	S	E	N	K	M	D	S	S	N	L	A	V	I	F	A	P	N	L	L	Q	T	S	S	N	T	E	K	K	L	R	L	Q	A	A	V	V	Q	T	L	I	D	Y	A	S	D	I	G	R	V	P	D	F	I	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T																					T																						T	G	G	G	T	T								T
	.	.
Sequence	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T