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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3eamB_

Fold library idPDB HeaderMoleculeTitle
c3eamB_PDB header: membrane protein, transport proteinChain: B: PDB Molecule: glr4197 protein;PDBTitle: an open-pore structure of a bacterial pentameric ligand-2 gated ion channel


Added to library: Tue Mar 16 14:25:01 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VSPPPPIADEPLTVNTGIYLIECYSLDDKAETFKVNAFLSLSWKDRRLAFDPVRSGVRVKTYEPEAIWIP
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Known secondary structure (DSSP)





SSS

TTTT
GGG


S
SS

GGGS


 .........80.........90.........100.........110.........120.........130.........140
Sequence EIRFVNVENARDADVVDISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNIVLAV
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Known secondary structure (DSSP)

SSBSS


TT




GGGTTS


SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence DLEKVGKNDDVFLTGWDIESFTAVVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPMLFILFISWT
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Known secondary structure (DSSP)
GGG

TT

BTTSSSS

TTTG
 .........220.........230.........240.........250.........260.........270.........280
Sequence AFWSTSYEANVTLVVSTLIAHIAFNILVETNLPKTPYMTYTGAIIFMIYLFYFVAVIEVTVQHYLKVESQ
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Known secondary structure (DSSP) GGG


TS


SS

TT
 .........290.........300.........310.
Sequence PARAASITRASRIAFPVVFLLANIILAFLFF
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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