PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3e6mD_

Fold library id	PDB Header	Molecule	Title
c3e6mD_	PDB header: transcription regulator	Chain: D: PDB Molecule: marr family transcriptional regulator;	PDBTitle: the crystal structure of a marr family transcriptional2 regulator from silicibacter pomeroyi dss.

Links to external resources
Added to library: Tue Mar 16 12:37:47 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P S F P Y G S P G E L N S F L P Y L L T R I T H I W S S E L N Q A L A S E K L P T P K L R L L S S L S A Y G E L T V G Q L A T L G V X E Q S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S S T T
T G G G T
S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T T S R T V D Q L V D E G L A A R S I S D A D Q R K R T V V L T R K G K K K L A E I S P L I N D F H A E L V G N V D P D K L Q T C I E V L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S S S
T S S S

. . . . . . . . .

Sequence E I L K G K T D Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	S	F	P	Y	G	S	P	G	E	L	N	S	F	L	P	Y	L	L	T	R	I	T	H	I	W	S	S	E	L	N	Q	A	L	A	S	E	K	L	P	T	P	K	L	R	L	L	S	S	L	S	A	Y	G	E	L	T	V	G	Q	L	A	T	L	G	V	X	E	Q	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	S	S					T	T																					T	G	G	G	T																S											T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	T	S	R	T	V	D	Q	L	V	D	E	G	L	A	A	R	S	I	S	D	A	D	Q	R	K	R	T	V	V	L	T	R	K	G	K	K	K	L	A	E	I	S	P	L	I	N	D	F	H	A	E	L	V	G	N	V	D	P	D	K	L	Q	T	C	I	E	V	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S							S	S	S	S																														T	S	S	S
	.	.	.	.	.	.	.	.	.
Sequence	E	I	L	K	G	K	T	D	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)