PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3e3mA_

Fold library id	PDB Header	Molecule	Title
c3e3mA_	PDB header: transcription	Chain: A: PDB Molecule: transcriptional regulator, laci family;	PDBTitle: crystal structure of a laci family transcriptional2 regulator from silicibacter pomeroyi

Links to external resources
Added to library: Tue Mar 16 12:45:56 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G F V G L L L P S L N N L H F A Q T A Q S L T D V L E Q G G L Q L L L G Y T A Y S P E R E E Q L V E T M L R R R P E A M V L S Y D G H T E Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
T T
T T
T
S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T I R L L Q R A S I P I V E I W E K P A H P I G H T V G F S N E R A A Y D M T N A L L A R G F R K I V F L G E K D D D W T R G A A R R A G F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
S S
S S
T T
S S S
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K R A M R E A G L N P D Q E I R L G A P P L S I E D G V A A A E L I L Q E Y P D T D C I F C V S D M P A F G L L S R L K S I G V A V P E Q V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S
S
S S
T T
S S T
T T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270

Sequence S V V G F G N F E V S R F A S P E I S T V R V D P I A I G R E T G S L I L R L L D A Q H I T L P P V L E F R P S L K N E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S
B
T
T T S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	F	V	G	L	L	L	P	S	L	N	N	L	H	F	A	Q	T	A	Q	S	L	T	D	V	L	E	Q	G	G	L	Q	L	L	L	G	Y	T	A	Y	S	P	E	R	E	E	Q	L	V	E	T	M	L	R	R	R	P	E	A	M	V	L	S	Y	D	G	H	T	E	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S		S	S																		T	T									T	T															T			S							S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	I	R	L	L	Q	R	A	S	I	P	I	V	E	I	W	E	K	P	A	H	P	I	G	H	T	V	G	F	S	N	E	R	A	A	Y	D	M	T	N	A	L	L	A	R	G	F	R	K	I	V	F	L	G	E	K	D	D	D	W	T	R	G	A	A	R	R	A	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S						S	S			S	S		S	S																					T	T			S							S	S		T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	R	A	M	R	E	A	G	L	N	P	D	Q	E	I	R	L	G	A	P	P	L	S	I	E	D	G	V	A	A	A	E	L	I	L	Q	E	Y	P	D	T	D	C	I	F	C	V	S	D	M	P	A	F	G	L	L	S	R	L	K	S	I	G	V	A	V	P	E	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S		S							S		S	S																		T	T							S	S															T			T	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Sequence	S	V	V	G	F	G	N	F	E	V	S	R	F	A	S	P	E	I	S	T	V	R	V	D	P	I	A	I	G	R	E	T	G	S	L	I	L	R	L	L	D	A	Q	H	I	T	L	P	P	V	L	E	F	R	P	S	L	K	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S								S	S	S			B																					T															T	T	S	T	T