PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3dzmB_

Fold library id	PDB Header	Molecule	Title
c3dzmB_	PDB header: unknown function	Chain: B: PDB Molecule: hypothetical conserved protein;	PDBTitle: crystal structure of a major outer membrane protein from2 thermus thermophilus hb27

Links to external resources
Added to library: Tue Mar 16 14:18:59 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H A A K F S V E A G A G F Y G G F G G Q L A V V A E D L A P G L P L G V R L G V G F A T S D A L D D G Y D L G G G T T W G D V K E A G K F S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S
B
T T
B
S S S
B T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E W G Q N V T L S L D V L Y K P L P V E V A P Y F G V R Y N F F S G G Y T D P E D N L T I K A Q T I S S N Q L G L G L G V R A A Y P L M P N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S S S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . .

Sequence L S L V G D L G V D Y Y F Q A C F T R V E E D D S G N K S Q S S V C P G D S G Y E D V N K F V T Q P E W V L K L R L G A A Y R F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S T T B
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	A	A	K	F	S	V	E	A	G	A	G	F	Y	G	G	F	G	G	Q	L	A	V	V	A	E	D	L	A	P	G	L	P	L	G	V	R	L	G	V	G	F	A	T	S	D	A	L	D	D	G	Y	D	L	G	G	G	T	T	W	G	D	V	K	E	A	G	K	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	S													S	S	S																	B		T	T		B		S	S	S		B									T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	W	G	Q	N	V	T	L	S	L	D	V	L	Y	K	P	L	P	V	E	V	A	P	Y	F	G	V	R	Y	N	F	F	S	G	G	Y	T	D	P	E	D	N	L	T	I	K	A	Q	T	I	S	S	N	Q	L	G	L	G	L	G	V	R	A	A	Y	P	L	M	P	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S																					S	S	S	S	S	S																								T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Sequence	L	S	L	V	G	D	L	G	V	D	Y	Y	F	Q	A	C	F	T	R	V	E	E	D	D	S	G	N	K	S	Q	S	S	V	C	P	G	D	S	G	Y	E	D	V	N	K	F	V	T	Q	P	E	W	V	L	K	L	R	L	G	A	A	Y	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	T										T	T	S	T	T								B				S