PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3dzaB_

Fold library id	PDB Header	Molecule	Title
c3dzaB_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: uncharacterized putative membrane protein;	PDBTitle: crystal structure of putative membrane protein of unknown2 function (yp_001337144.1) from klebsiella pneumoniae3 subsp. pneumoniae mgh 78578 at 1.65 a resolution

Links to external resources
Added to library: Tue Mar 16 14:39:41 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A P A A A A T T Q V Q K E A A D V L Q V A V Q G A N A X R D I Q F A R L A L F H G Q P D S A K K L T D D A A A L L A A D D A S W A K F V K T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T
T S
G G G B
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D A K A K X I A D R Y V I I N A S I A L S E D Y V A T P E K E S A I Q S A N E K L A K G D Q K G A I D T L R L A G I G V I E N Q Y L X P L N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S S
T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180

Sequence Q T R K A V A Q S Q E L L K A G K Y Y E A N L V L K G A E E G I V V D S E X L V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	P	A	A	A	A	T	T	Q	V	Q	K	E	A	A	D	V	L	Q	V	A	V	Q	G	A	N	A	X	R	D	I	Q	F	A	R	L	A	L	F	H	G	Q	P	D	S	A	K	K	L	T	D	D	A	A	A	L	L	A	A	D	D	A	S	W	A	K	F	V	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T																				T	T	T																	T	S						G	G	G	B		T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	A	K	A	K	X	I	A	D	R	Y	V	I	I	N	A	S	I	A	L	S	E	D	Y	V	A	T	P	E	K	E	S	A	I	Q	S	A	N	E	K	L	A	K	G	D	Q	K	G	A	I	D	T	L	R	L	A	G	I	G	V	I	E	N	Q	Y	L	X	P	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					S	S	S	S																																		T	T												T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence	Q	T	R	K	A	V	A	Q	S	Q	E	L	L	K	A	G	K	Y	Y	E	A	N	L	V	L	K	G	A	E	E	G	I	V	V	D	S	E	X	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T															T