Fold library entry viewer: c3dmqA_

Added to library: Tue Mar 16 13:48:22 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	F	T	L	G	Q	R	W	I	S	D	T	E	S	E	L	G	L	G	T	V	V	A	V	D	A	R	T	V	T	L	L	F	P	S	T	G	E	N	R	L	Y	A	R	S	D	S	P	V	T	R	V	X	F	N	P	G	D	T	I	T	S	H	D	G	W	Q	X	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T						S	S		G	G	G										S	S							T	T	T	T							T	T	T										T	T					B	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	E	V	K	E	E	N	G	L	L	T	Y	I	G	T	R	L	D	T	E	E	S	G	V	A	L	R	E	V	F	L	D	S	K	L	V	F	S	K	P	Q	D	R	L	F	A	G	Q	I	D	R	X	D	R	F	A	L	R	Y	R	A	R	K	Y	S	S	E	Q	F	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S									T	T	T				S					G	G	G	B		S	S										T	T		S	S								T	T													T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	X	P	Y	S	G	L	R	G	Q	R	T	S	L	I	P	H	Q	L	N	I	A	H	D	V	G	R	R	H	A	P	R	V	L	L	A	D	E	V	G	L	G	K	T	I	E	A	G	X	I	L	H	Q	Q	L	L	S	G	A	A	E	R	V	L	I	I	V	P	E	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		S	S	S			S	S																S	S	S									T	T	S																T	S	S										T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	H	Q	W	L	V	E	X	L	R	R	F	N	L	R	F	A	L	F	D	D	E	R	Y	A	E	A	Q	H	D	A	Y	N	P	F	D	T	E	Q	L	V	I	C	S	L	D	F	A	R	R	S	K	Q	R	L	E	H	L	C	E	A	E	W	D	L	L	V	V	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S																		T	T		S	S	S	T	T		S											T	S	T	T	T	T					T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	H	H	L	V	W	S	E	D	A	P	S	R	E	Y	Q	A	I	E	Q	L	A	E	H	V	P	G	V	L	L	L	T	A	T	P	E	Q	L	G	X	E	S	H	F	A	R	L	R	L	L	D	P	N	R	F	H	D	F	A	Q	F	V	E	E	Q	K	N	Y	C	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S					B	T	T	B													T	T		S	S				S		S	S		S	S	S		S	S		T									T	T	T		S	S	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	A	D	A	V	A	X	L	L	A	G	N	K	L	S	N	D	E	L	N	X	L	G	E	X	I	G	E	Q	D	I	E	P	L	L	Q	A	A	N	S	D	S	E	D	A	Q	S	A	R	Q	E	L	V	S	X	L	X	D	R	H	G	T	S	R	V	L	F	R	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T	S					G	G	G	T	T	S	S	T	T	T	T		T	T		S	S	T	T	G	G	G	T				S	S		S	T	T	T									G	G	G		T	T	T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	N	G	V	K	G	F	P	K	R	E	L	H	T	I	K	L	P	L	P	T	Q	Y	Q	T	A	I	K	V	S	G	I	X	G	A	R	K	S	A	E	D	R	A	R	D	X	L	Y	P	E	R	I	Y	Q	E	F	E	G	D	N	A	T	W	W	N	F	D	P	R	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T																														T	T			S	S	G	G	G	G	T						S	G	G	G	T	T	T	T	T	S	S	S			T	T	T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	W	L	X	G	Y	L	T	S	H	R	S	Q	K	V	L	V	I	C	A	K	A	A	T	A	L	Q	L	E	Q	V	L	R	E	R	E	G	I	R	A	A	V	F	H	E	G	X	S	I	I	E	R	D	R	A	A	A	W	F	A	E	E	D	T	G	A	Q	V	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	S	S	S							S	S	T												T	T	T									T	T	S		T	T											S	T	T	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	C	S	E	I	G	S	E	G	R	N	F	Q	F	A	S	H	X	V	X	F	D	L	P	F	N	P	D	L	L	E	Q	R	I	G	R	L	D	R	I	G	Q	A	H	D	I	Q	I	H	V	P	Y	L	E	K	T	A	Q	S	V	L	V	R	W	Y	H	E	G	L	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S			T	T		S	S			T	T							S	S			S	S										T	T	S		S	S	S		S										T	T	S												T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	F	E	H	T	C	P	T	G	R	T	I	Y	D	S	V	Y	N	D	L	I	N	Y	L	A	S	P	D	Q	T	E	G	F	D	D	L	I	K	N	C	R	E	Q	H	E	A	L	K	A	Q	L	E	Q	G	R	D	R	L	L	E	I	H	S	N	G	G	E	K	A	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S			S	S																				S			T	T																					T	T			T	T					T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	A	E	S	I	E	E	Q	D	D	D	T	N	L	I	A	F	A	X	N	L	F	D	I	I	G	I	N	Q	D	D	R	G	D	N	X	I	V	L	T	P	S	D	H	X	L	V	P	D	F	P	G	L	S	E	D	G	I	T	I	T	F	D	R	E	V	A	L	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T																T	T							S	S	S								S	S		S	S	S			S			S													T	S		S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	E	D	A	Q	F	I	T	W	E	H	P	L	I	R	N	G	L	D	L	I	L	S	G	D	T	G	S	S	T	I	S	L	L	K	N	K	A	L	P	V	G	T	L	L	V	E	L	I	Y	V	V	E	A	Q	A	P	K	Q	L	Q	L	N	R	F	L	P	P	T	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S	T	T							T					S	S	T	T						S		S		T	T		S	S			S																	G	G	G		T	T	T	T			S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	R	X	L	L	D	K	N	G	N	N	L	A	A	Q	V	E	F	E	T	F	N	R	Q	L	N	A	V	N	R	H	T	G	S	K	L	V	N	A	V	Q	Q	D	V	H	A	I	L	Q	L	G	E	A	Q	I	E	K	S	A	R	A	L	I	D	A	A	R	N	E	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S	S		B			S		S					T	T								S	S	S	S	G	G	G	T	T	T	T														S	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.
Sequence	E	K	L	S	A	E	L	S	R	L	E	A	L	R	A	V	N	P	N	I	R	D	D	E	L	T	A	I	E	S	N	R	Q	Q	V	X	E	S	L	D	Q	A	G	W	R	L	D	A	L	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T		S	S			T																		T	T

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PDB structure

FASTA sequence

Hidden Markov model

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