PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3dluA_

Fold library id	PDB Header	Molecule	Title
c3dluA_	PDB header: rna binding protein	Chain: A: PDB Molecule: signal recognition particle 19 kda protein;	PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus.

Links to external resources
Added to library: Tue Mar 16 13:11:25 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G R F V V W P S E L D S R L S R K Y G R I V P R S I A V E S P R V E E I V R A A E E L K F K V I R V E E D K L N P E L R T F G M I V L E S P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G B T T S
G G G T
S
T T T S B S S
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . .

Sequence Y G K S K S L K L I A Q K I R E F R R R S A G T L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	R	F	V	V	W	P	S	E	L	D	S	R	L	S	R	K	Y	G	R	I	V	P	R	S	I	A	V	E	S	P	R	V	E	E	I	V	R	A	A	E	E	L	K	F	K	V	I	R	V	E	E	D	K	L	N	P	E	L	R	T	F	G	M	I	V	L	E	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							G	G	G	G	B	T	T	S		G	G	G	T			S		T	T	T	S	B	S	S													T	T																										S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Sequence	Y	G	K	S	K	S	L	K	L	I	A	Q	K	I	R	E	F	R	R	R	S	A	G	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																						T