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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3dkpA_

Fold library idPDB HeaderMoleculeTitle
c3dkpA_PDB header: hydrolaseChain: A: PDB Molecule: probable atp-dependent rna helicase ddx52;PDBTitle: human dead-box rna-helicase ddx52, conserved domain i in2 complex with adp


Added to library: Tue Mar 16 13:08:18 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SMKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELL
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 .........80.........90.........100.........110.........120.........130.........140
Sequence ASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAK
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Known secondary structure (DSSP)

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T
 .........150.........160.........170.........180.........190.........200.........210
Sequence KFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGGFRDQLASIFLACTSHKVR
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Known secondary structure (DSSP) TTSTTS





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 .........220.........230.........240
Sequence RAMFSATFAYDVEQWCKLNLDNVISVSIGA
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Known secondary structure (DSSP) SS

SSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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