Fold library entry viewer: c3ddsB_

Added to library: Tue Mar 16 13:41:57 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	V	A	E	L	K	K	S	F	N	R	H	L	H	F	T	L	V	K	D	R	N	V	A	T	T	R	D	Y	Y	F	A	L	A	H	T	V	R	D	H	L	V	G	R	W	I	R	T	Q	Q	H	Y	Y	D	K	C	P	K	R	V	Y	Y	L	S	L	E	F	Y	M	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	S				G	G	G																																										S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	T	L	Q	N	T	M	I	N	L	G	L	Q	N	A	C	D	E	A	I	Y	Q	L	G	L	D	I	E	E	L	E	E	I	E	E	D	A	G	L	G	N	G	G	L	G	R	L	A	A	C	F	L	D	S	M	A	T	L	G	L	A	A	Y	G	Y	G	I	R	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T												T	T								T	T	S								S																T	T											S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	G	I	F	N	Q	K	I	R	D	G	W	Q	V	E	E	A	D	D	W	L	R	Y	G	N	P	W	E	K	S	R	P	E	F	M	L	P	V	H	F	Y	G	K	V	E	H	T	N	T	G	T	K	W	I	D	T	Q	V	V	L	A	L	P	Y	D	T	P	V	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		S							T	T									T	T	T	T			T	T					G	G	G							S							T	T						S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Y	M	N	N	T	V	N	T	M	R	L	W	S	A	R	A	P	N	D	F	N	L	R	D	G	D	Y	I	Q	A	V	L	D	R	N	L	A	E	N	I	S	R	V	L	Y	P	N	D	N	F	F	E	G	K	E	L	R	L	K	Q	E	Y	F	V	V	A	A	T	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	S															S			T	T										T						G	G	G	S	B					S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	I	I	R	R	F	K	A	S	K	F	G	S	T	G	T	V	F	D	A	F	P	D	Q	V	A	I	Q	L	N	D	T	H	P	A	L	A	I	P	E	L	M	R	I	F	V	D	I	E	K	L	P	W	S	K	A	W	E	L	T	Q	K	T	F	A	Y	T	N	H	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	G	G	G					G	G	G	G											S	S	T	T	T	T												T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	V	L	P	E	A	L	E	R	W	P	V	D	L	V	E	K	L	L	P	R	H	L	E	I	I	Y	E	I	N	Q	K	H	L	D	R	I	V	A	L	F	P	K	D	V	D	R	L	R	R	M	S	L	I	E	E	E	G	S	K	R	I	N	M	A	H	L	C	I	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G																																				T	T										S				S	S	S												T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	H	A	V	N	G	V	A	K	I	H	S	D	I	V	K	T	K	V	F	K	D	F	S	E	L	E	P	D	K	F	Q	N	K	T	N	G	I	T	P	R	R	W	L	L	L	C	N	P	G	L	A	E	L	I	A	E	K	I	G	E	D	Y	V	K	D	L	S	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S					S	S										T	T	T								G	G	G								B		T							T														S	G	G	G	T		G	G	G	G
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	K	L	H	S	F	L	G	D	D	V	F	L	R	E	L	A	K	V	K	Q	E	N	K	L	K	F	S	Q	F	L	E	T	E	Y	K	V	K	I	N	P	S	S	M	F	D	V	Q	V	K	R	I	H	E	Y	K	R	Q	L	L	N	C	L	H	V	I	T	M	Y	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	G	G	G	T	T																																	T	T	S							S				T	T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	R	I	K	K	D	P	K	K	L	F	V	P	R	T	V	I	I	G	G	K	A	A	P	G	Y	H	M	A	K	M	I	I	K	L	I	T	S	V	A	D	V	V	N	N	D	P	M	V	G	S	K	L	K	V	I	F	L	E	N	Y	R	V	S	L	A	E	K	V	I	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S															T	T																						T	T	T	G	G	G							T	T										G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	T	D	L	S	E	Q	I	S	T	A	G	T	E	A	S	G	T	G	N	M	K	F	M	L	N	G	A	L	T	I	G	T	M	D	G	A	N	V	E	M	A	E	E	A	G	E	E	N	L	F	I	F	G	M	R	I	D	D	V	A	A	L	D	K	K	G	Y	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G		S								T	T	S		S			S								T	T							S		T	T										G	G	G	S				S																T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	K	E	Y	Y	E	A	L	P	E	L	K	L	V	I	D	Q	I	D	N	G	F	F	S	P	K	Q	P	D	L	F	K	D	I	I	N	M	L	F	Y	H	D	R	F	K	V	F	A	D	Y	E	A	Y	V	K	C	Q	D	K	V	S	Q	L	Y	M	N	P	K	A	W	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T	T		T	T	S	T	T	T	T												T	T																					T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.
Sequence	T	M	V	L	K	N	I	A	A	S	G	K	F	S	S	D	R	T	I	K	E	Y	A	Q	N	I	W	N	V	E	P	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T		G	G	G	B												T	T

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PDB structure

FASTA sequence

Hidden Markov model

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