PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3dcfB_

Fold library id	PDB Header	Molecule	Title
c3dcfB_	PDB header: transcription regulator	Chain: B: PDB Molecule: transcriptional regulator of the tetr/acrr	PDBTitle: crystal structure of transcriptional regulator of the2 tetr/acrr family (yp_290855.1) from thermobifida fusca yx-3 er1 at 2.50 a resolution

Links to external resources
Added to library: Tue Mar 16 14:10:52 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N D R R T Q I I K V A T E L F R E K G Y Y A T S L D D I A D R I G F T K P A I Y Y Y F K S K E D V L F A I V N S I V D E A L E R F H A I A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T T
T
S S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G P G S P G E R I H A L L V E H T R T I L R N L D A N T L F Y N L S P E R E R E X R K R E R E Y T E I X Q R L Y A E G V A T G E L L D V D P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
S
T T S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . .

Sequence T V A T A T L L G A A I W T Y R W Y D P E G R L S A D E V V E Q I T R L L L N G Y R R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T S S S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	D	R	R	T	Q	I	I	K	V	A	T	E	L	F	R	E	K	G	Y	Y	A	T	S	L	D	D	I	A	D	R	I	G	F	T	K	P	A	I	Y	Y	Y	F	K	S	K	E	D	V	L	F	A	I	V	N	S	I	V	D	E	A	L	E	R	F	H	A	I	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T		T	T	T											T											S	S																									T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	P	G	S	P	G	E	R	I	H	A	L	L	V	E	H	T	R	T	I	L	R	N	L	D	A	N	T	L	F	Y	N	L	S	P	E	R	E	R	E	X	R	K	R	E	R	E	Y	T	E	I	X	Q	R	L	Y	A	E	G	V	A	T	G	E	L	L	D	V	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S																				S																																							T	T	S	S			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Sequence	T	V	A	T	A	T	L	L	G	A	A	I	W	T	Y	R	W	Y	D	P	E	G	R	L	S	A	D	E	V	V	E	Q	I	T	R	L	L	L	N	G	Y	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T							T	T	S	S	S																	S