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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3d9oB_

Fold library idPDB HeaderMoleculeTitle
c3d9oB_PDB header: transcriptionChain: B: PDB Molecule: rna-binding protein 16;PDBTitle: snapshots of the rna processing factor scaf8 bound to2 different phosphorylated forms of the carboxy-terminal3 domain of rna-polymerase ii


Added to library: Tue Mar 16 12:44:38 2010
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence XEAVKTFNSELYSLXDXKPPISKAKXTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIV
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP)
GGGGS
SS

TGGGS
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence RQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDXAAALEH
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP)
TTT
STTTS
GGGTTSS
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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