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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3d6kB_

Fold library idPDB HeaderMoleculeTitle
c3d6kB_PDB header: transferaseChain: B: PDB Molecule: putative aminotransferase;PDBTitle: the crystal structure of a putative aminotransferase from2 corynebacterium diphtheriae


Added to library: Tue Mar 16 14:01:42 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LAQVREEVTAKYAELKAKNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRE
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Known secondary structure (DSSP)

TTT


S


S

TTGGGGG
STT

B
TT

BTTSS

SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence LWAEALGLPADLVVAQDGSSLNIXFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGF
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Known secondary structure (DSSP) T

GGG
SS


TT
SS
GGGSS

S

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence EXINVPXTDEGPDXGVVRELVKDPQVKGXWTVPVFGNPTGVTFSEQTCRELAEXSTAAPDFRIVWDNAYA
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Known secondary structure (DSSP) TT
TTSTT

SS
TTT







SSTT

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LHTLSDEFPIVHNVIEFAQAAGNPNRFWFXSSTSKITHAGSGVSFFASSKENIEWYASHANVRGIGPNKL
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Known secondary structure (DSSP) T
BSSS






T
TT
STTTS
TTSS



S


 .........290.........300.........310.........320.........330.........340.........350
Sequence NQLAHAQFFGDVAGLKAHXLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPGTASRV
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Known secondary structure (DSSP)
SGGG
S


SBSS
STT
 .........360.........370.........380.........390.........400.........
Sequence VELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAXDGFATCVLXAALEV
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Known secondary structure (DSSP) TT


TTTTSGGG

TTS


SSS
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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