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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3d5bD_

Fold library idPDB HeaderMoleculeTitle
c3d5bD_PDB header: ribosomeChain: D: PDB Molecule: 50s ribosomal protein l2;PDBTitle: structural basis for translation termination on the 70s2 ribosome. this file contains the 50s subunit of one 70s3 ribosome. the entire crystal structure contains two 70s4 ribosomes as described in remark 400.


Added to library: Tue Mar 16 12:40:25 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AVKKFKPYTPSRRFMTVADFSEITKTEPEKSLVKPLKKTGGRNNQGRITVRFRGGGHKRLYRIIDFKRWD
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Known secondary structure (DSSP)




SSSSSSS


GGGS
S

S


SSS


SS
SSSS
SSSSB








SSTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KVGIPAKVAAIEYDPNRSARIALLHYVDGEKRYIIAPDGLQVGQQVVAGPDAPIQVGNALPLRFIPVGTV
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Known secondary structure (DSSP) TSS



TTSSSTTT

T

TT

BSTTS


TT
GGGS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VHAVELEPKKGAKLARAAGTSAQIQGREGDYVILRLPSGELRKVHGECYATVGAVGNADHKNIVLGKAGR
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Known secondary structure (DSSP) SSTTT


STT

TT
TTS
TT
SS

GGGG



ST
 .........220.........230.........240.........250.........260.........270.
Sequence SRWLGRRPHVRGAAMNPVDHPHGGGEGRAPRGRPPASPWGWQTKGLKTRKRRKPSSRFIIA
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Known secondary structure (DSSP) TTB




STTS
GGG
SS


SSS


SSS
B
TTS
B
SS


S
TT
GGGGS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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