PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3d3mB_

Fold library id	PDB Header	Molecule	Title
c3d3mB_	PDB header: translation	Chain: B: PDB Molecule: eukaryotic translation initiation factor 4 gamma	PDBTitle: the crystal structure of the c-terminal region of death2 associated protein 5(dap5)

Links to external resources
Added to library: Tue Mar 16 13:30:37 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L L K L E K E L L K Q I K L D P S P Q T I Y K W I K D N I S P K L H V D K G F V N I L M T S F L Q Y I S S E V N P A P S K E Q L E Q E K Q L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L L S F K P V M Q K F L H D H V D L Q V S A L Y A L Q V H C Y N S N F P K G M L L R F F V H F Y D M E I I E E E A F L A W K E D I T Q E F P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T
T T T T S S
S S
T

. . . . . . . . . 150 . . . . . . .

Sequence G K G K A L F Q V N Q W L T W L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	L	K	L	E	K	E	L	L	K	Q	I	K	L	D	P	S	P	Q	T	I	Y	K	W	I	K	D	N	I	S	P	K	L	H	V	D	K	G	F	V	N	I	L	M	T	S	F	L	Q	Y	I	S	S	E	V	N	P	A	P	S	K	E	Q	L	E	Q	E	K	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																													S		T	T	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	L	S	F	K	P	V	M	Q	K	F	L	H	D	H	V	D	L	Q	V	S	A	L	Y	A	L	Q	V	H	C	Y	N	S	N	F	P	K	G	M	L	L	R	F	F	V	H	F	Y	D	M	E	I	I	E	E	E	A	F	L	A	W	K	E	D	I	T	Q	E	F	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T																		T	T	T			T	T												T	T	S	S													S	S			T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Sequence	G	K	G	K	A	L	F	Q	V	N	Q	W	L	T	W	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T