PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3d2oB_

Fold library id	PDB Header	Molecule	Title
c3d2oB_	PDB header: hydrolase, biosynthetic protein	Chain: B: PDB Molecule: upf0343 protein ngo0387;	PDBTitle: crystal structure of manganese-metallated gtp cyclohydrolase2 type ib

Links to external resources
Added to library: Sun Aug 29 03:02:20 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N L P I N Q V G I K D L R F P I T L K T A E G T Q S T V A R L T M T V Y L P A E Q K G T H M S R F V A L M E Q H T E V L D F A Q L H R L T A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T
B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E M V A L L D S R A G K I S V S F P F F R K K T A P V S G I R S L L D Y D V S L T G E M K D G A Y G H S M K V M I P V T S L C P C S K E I S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T T T
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q Y G A H N Q R S H V T V S L T S D A E V G I E E V I D Y V E T Q A S C Q L Y G L L K R P D E K Y V T E K A Y E N P K F V E D M V R D V A T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S
S S
S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . .

Sequence S L I A D K R I K S F V V E S E N F E S I H N H S A Y A Y I A Y P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
T T S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	L	P	I	N	Q	V	G	I	K	D	L	R	F	P	I	T	L	K	T	A	E	G	T	Q	S	T	V	A	R	L	T	M	T	V	Y	L	P	A	E	Q	K	G	T	H	M	S	R	F	V	A	L	M	E	Q	H	T	E	V	L	D	F	A	Q	L	H	R	L	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T	T																	T	T						T														B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	M	V	A	L	L	D	S	R	A	G	K	I	S	V	S	F	P	F	F	R	K	K	T	A	P	V	S	G	I	R	S	L	L	D	Y	D	V	S	L	T	G	E	M	K	D	G	A	Y	G	H	S	M	K	V	M	I	P	V	T	S	L	C	P	C	S	K	E	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T		S																	T	T	T																		T	T																							S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	Y	G	A	H	N	Q	R	S	H	V	T	V	S	L	T	S	D	A	E	V	G	I	E	E	V	I	D	Y	V	E	T	Q	A	S	C	Q	L	Y	G	L	L	K	R	P	D	E	K	Y	V	T	E	K	A	Y	E	N	P	K	F	V	E	D	M	V	R	D	V	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																S	S															S	S					S																	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Sequence	S	L	I	A	D	K	R	I	K	S	F	V	V	E	S	E	N	F	E	S	I	H	N	H	S	A	Y	A	Y	I	A	Y	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T		T	T													T	T	S	S	S