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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3d0oA_

Fold library idPDB HeaderMoleculeTitle
c3d0oA_PDB header: oxidoreductaseChain: A: PDB Molecule: l-lactate dehydrogenase 1;PDBTitle: crystal structure of lactate dehydrogenase from2 staphylococcus aureus


Added to library: Sat Aug 28 15:53:32 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCH
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Known secondary structure (DSSP)





S
S
S
S
GGGSSS



GGGGT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPVDILAYATWKFSGLPKER
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Known secondary structure (DSSP) T
S






TT

TT

S
SSS


GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence VIGSGTILDSARFRLLLSEAFDVAPRSVDAQIIGEHGDTELPVWSHANIAGQPLKTLLEQRPEGKAQIEQ
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Known secondary structure (DSSP)
TTTS
GGG
B

B
SSTT

TTT
TTTSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence IFVQTRDAAYDIIQAKGATYYGVAMGLARITEAIFRNEDAVLTVSALLEGEYEEEDVYIGVPAVINRNGI
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Known secondary structure (DSSP) TS


TT

SGGG
TT
 .........290.........300.........
Sequence RNVVEIPLNDEEQSKFAHSAKTLKDIMAE
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Known secondary structure (DSSP)







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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