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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3d0kA_

Fold library idPDB HeaderMoleculeTitle
c3d0kA_PDB header: hydrolaseChain: A: PDB Molecule: putative poly(3-hydroxybutyrate) depolymerasePDBTitle: crystal structure of the lpqc, poly(3-hydroxybutyrate)2 depolymerase from bordetella parapertussis


Added to library: Tue Mar 16 13:35:32 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DLTNADRIALELGHAGRNAIPYLDNADRPFTLNTYRPYGYTPDRPVVVVQHGVLRNGADYRDFWIPAADR
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Known secondary structure (DSSP)


SSSS


TT


TT

TTS


TT

T
 .........80.........90.........100.........110.........120.........130.........140
Sequence HKLLIVAPTFSDEIWPGVESYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAG
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Known secondary structure (DSSP) T


TTTS
TTTTT
B
TTS
B

GGGSTTTTS


SST
 .........150.........160.........170.........180.........190.........200.........210
Sequence GQFVHRLXSSQPHAPFHAVTAANPGWYTLPTFEHRFPEGLDGVGLTEDHLARLLAYPXTILAGDQDIATP
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Known secondary structure (DSSP) S
STT
SS
SS


SSTTSBTTTSSBTTT

S

TT




 .........220.........230.........240.........250.........260.........270.........280
Sequence NLPSEPAALRQGPHRYARARHYYEAGQRAAAQRGLPFGWQLQVVPGIGHDGQAXSQVCASLWFDGRXPDA
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Known secondary structure (DSSP)
S

STT
SST




TT

S
TSS


 .......
Sequence AELARLA
Predicted secondary structure


SS confidence






Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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