PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3cwoX_

Fold library id	PDB Header	Molecule	Title
c3cwoX_	PDB header: de novo protein	Chain: X: PDB Molecule: beta/alpha-barrel protein based on 1thf and 1tmy;	PDBTitle: a beta/alpha-barrel built by the combination of fragments2 from different folds

Links to external resources
Added to library: Tue Mar 16 13:30:58 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G K R V L I V D D A T N G R E A V E K Y K E L K P D I V T M D I T M P E M N G I D A I K E I M K I D P N A K I I V C S A M G Q Q A M V I E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S T T
S
S T T S S S S S
S S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I K A G A K D F I V N T A A V E N P S L I T Q I A Q T F G S Q A V V V A I D A K R V D G E F M V F T Y S G K K N T G I L L R D W V V E V E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T T G G G S S S
T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R G A G E I L L T S I D R D G T K S G Y D T E M I R F V R P L T T L P I I A S G G A G K M E H F L E A F L A G A D A A L A A S V F H F R E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S T T T T T
S
G G G
S
S
S T
S S T T S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . .

Sequence D V R E L K E Y L K K H G V N V R L E G L L E H H H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	K	R	V	L	I	V	D	D	A	T	N	G	R	E	A	V	E	K	Y	K	E	L	K	P	D	I	V	T	M	D	I	T	M	P	E	M	N	G	I	D	A	I	K	E	I	M	K	I	D	P	N	A	K	I	I	V	C	S	A	M	G	Q	Q	A	M	V	I	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S	S	T	T										S								S	T	T	S	S												S	S	S									S	S	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	K	A	G	A	K	D	F	I	V	N	T	A	A	V	E	N	P	S	L	I	T	Q	I	A	Q	T	F	G	S	Q	A	V	V	V	A	I	D	A	K	R	V	D	G	E	F	M	V	F	T	Y	S	G	K	K	N	T	G	I	L	L	R	D	W	V	V	E	V	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T							S							T											T	G	G	G										S	S	S							T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	G	A	G	E	I	L	L	T	S	I	D	R	D	G	T	K	S	G	Y	D	T	E	M	I	R	F	V	R	P	L	T	T	L	P	I	I	A	S	G	G	A	G	K	M	E	H	F	L	E	A	F	L	A	G	A	D	A	A	L	A	A	S	V	F	H	F	R	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T		S							T	T	T	T	T			S											G	G	G			S						S				S											T		S					S					T	T	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Sequence	D	V	R	E	L	K	E	Y	L	K	K	H	G	V	N	V	R	L	E	G	L	L	E	H	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	T