PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3csyK_

Fold library id	PDB Header	Molecule	Title
c3csyK_	PDB header: immune system/viral protein	Chain: K: PDB Molecule: envelope glycoprotein gp1;	PDBTitle: crystal structure of the trimeric prefusion ebola virus2 glycoprotein in complex with a neutralizing antibody from a3 human survivor

Links to external resources
Added to library: Tue Mar 16 11:55:37 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R S I P L G V I H N S V L Q V S D V D K L V C R D K L S S T N Q L R S V G L N L E G N G V A T D V P S A T K R W G F R S G V P P K V V N Y E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S S
S
S
G G G G G G G S
S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A G E W A E N C Y N L E I K K P D G S E C L P A A P D G I R G F P R C R Y V H K V S G T G P C A G D F A F H K E G A F F L Y D R L A S T V I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
B S S
T T
S
S S T T S
T T S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y R G T T F A E G V V A F L I L P Q A Y S T T I R Y Q A T G F G T N E V E Y L F E V D N L T Y V Q L E S R F T P Q F L L Q L N E T I Y T S G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S S S S S
S S S S
S

. . . . . . . . . 220 . . . . . . . . . 230 . .

Sequence K R S N T T G K L I W K V N R S E E L S F T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	S	I	P	L	G	V	I	H	N	S	V	L	Q	V	S	D	V	D	K	L	V	C	R	D	K	L	S	S	T	N	Q	L	R	S	V	G	L	N	L	E	G	N	G	V	A	T	D	V	P	S	A	T	K	R	W	G	F	R	S	G	V	P	P	K	V	V	N	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T							S	S	S			S		S					G	G	G								G	G	G	G	S																	S	S								S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	G	E	W	A	E	N	C	Y	N	L	E	I	K	K	P	D	G	S	E	C	L	P	A	A	P	D	G	I	R	G	F	P	R	C	R	Y	V	H	K	V	S	G	T	G	P	C	A	G	D	F	A	F	H	K	E	G	A	F	F	L	Y	D	R	L	A	S	T	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	S	S		B	S	S					T	T					S																S	S					T	T	S						T	T				S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	R	G	T	T	F	A	E	G	V	V	A	F	L	I	L	P	Q	A	Y	S	T	T	I	R	Y	Q	A	T	G	F	G	T	N	E	V	E	Y	L	F	E	V	D	N	L	T	Y	V	Q	L	E	S	R	F	T	P	Q	F	L	L	Q	L	N	E	T	I	Y	T	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																											S	S	S	S	S	S							S	S	S	S							S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Sequence	K	R	S	N	T	T	G	K	L	I	W	K	V	N	R	S	E	E	L	S	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S