Fold library entry viewer: c3cskA_

Added to library: Tue Mar 16 13:17:39 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	H	F	F	A	D	H	D	A	P	L	S	M	L	S	V	K	T	E	Y	F	P	Q	L	T	D	K	E	Q	K	Y	A	H	F	M	S	K	A	S	H	A	G	S	R	V	V	M	R	Q	V	S	H	E	S	E	P	I	F	D	L	I	L	A	I	H	S	K	L	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B			S	S									T	T	T	T	G	G	G	S																	T	T										T	T															T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	Y	P	E	D	D	I	T	Q	K	Q	Q	T	G	L	Y	L	E	Y	V	S	Q	F	L	S	N	L	G	N	F	K	S	F	G	D	T	K	F	I	P	R	C	E	V	K	F	F	K	Q	L	L	E	L	A	K	I	N	P	S	S	S	P	L	T	L	S	P	V	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S																					T	S	S	B		T	T	T		B	B		B		S	S												T	T			T	T	S		G	G	G	G	S		T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	H	E	F	T	S	H	H	L	F	S	T	I	N	E	L	I	D	I	G	I	Y	H	V	E	E	K	A	A	L	L	G	F	P	S	Q	G	Y	T	S	A	Y	Y	L	G	L	P	V	T	P	E	D	M	A	L	L	K	E	Q	L	F	A	E	L	A	I	L	P	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	S	S	G	G	G		S	S							T	T	T	T				T	T	T	T	B	B	S		G	G	G	T		B		T	T				S														T					T				T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	R	I	N	K	V	G	E	N	S	F	Q	I	W	V	A	S	E	N	V	K	N	Q	I	T	E	T	Y	P	S	G	Q	I	T	L	S	N	A	V	T	K	V	E	F	I	F	G	D	H	S	R	E	M	R	L	V	A	S	Y	L	K	E	A	Q	K	F	A	A	N	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T									S		S	S				T	T	T	S			S					T	T	S											T																T	T		S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	Q	K	A	M	L	Q	E	Y	I	N	H	F	V	T	G	S	S	Q	A	H	K	E	A	Q	K	L	W	V	K	D	I	S	P	V	I	E	T	N	I	G	F	I	E	T	Y	R	E	P	S	G	I	I	G	E	F	E	S	L	V	A	I	Q	N	K	E	R	T	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																														T	S		S		S											S	S	S	T	T	S		S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	F	S	S	L	V	N	N	A	E	E	F	I	S	L	L	P	W	S	K	D	Y	E	K	P	I	F	N	P	P	D	F	T	S	L	E	V	L	T	F	T	G	S	G	I	P	A	G	I	N	I	P	N	Y	D	D	V	R	L	K	I	G	F	K	N	V	S	L	G	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T								S	S	S		G	G	G	S		S	S																S	S				S														T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	S	A	A	A	K	S	S	S	K	H	P	P	S	F	I	S	Q	E	D	R	P	I	F	E	K	Y	Q	S	D	S	F	E	V	Q	V	D	I	H	E	L	L	G	H	G	S	G	K	L	L	T	E	F	T	D	G	F	N	F	D	K	E	N	P	P	L	G	L	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T			S	S			T	T	B		T	T	T																															B			T	T			S	S		S	S	S			B		T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	P	V	S	T	Y	Y	K	V	G	E	T	W	G	S	K	F	G	Q	L	A	G	P	F	E	E	C	R	A	E	V	I	A	M	F	L	L	T	N	K	K	I	L	D	I	F	G	F	H	D	V	E	S	Q	D	K	V	I	Y	A	G	Y	L	Q	M	A	R	A	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	B					B		T	T								G	G	G																	T	T								T	T			S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	A	L	E	Y	W	N	P	K	T	G	K	W	G	Q	P	H	M	Q	A	R	F	S	I	M	K	T	F	M	K	H	S	T	D	K	N	F	L	K	L	E	M	N	S	T	N	D	D	F	A	I	K	L	D	K	S	L	I	K	T	A	G	H	E	C	V	K	D	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	G	B		T	T	T			B	S																	S	S	S	S	T	T	S							T	T	S	S								G	G	G	T	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	K	H	L	H	V	Y	K	C	S	G	D	V	E	Q	G	S	K	Y	F	I	D	R	S	T	V	T	P	D	L	A	S	L	R	D	I	V	L	S	K	R	L	P	R	R	Q	F	I	Q	S	N	S	Y	I	D	D	N	N	K	V	T	L	K	E	Y	D	E	T	P	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T													T								T	T							T																T	T	S									S	S
	.	.	.	.	.	.	.	.	.	710
Sequence	M	L	Q	S	F	L	D	R	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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