PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3cmuA_

Fold library id	PDB Header	Molecule	Title
c3cmuA_	PDB header: recombination/dna	Chain: A: PDB Molecule: protein reca;	PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures

Links to external resources
Added to library: Tue Mar 16 14:11:37 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V E T I S T G S L S L D I A L G A G G L P M G R I V E I Y G P E S S G K T T L T L Q V I A A A Q R E G K T C A F I D A E H A L D P I Y A R K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S S T T S
T T S S T T T
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L G V D I D N L L C S Q P D T G E Q A L E I C D A L A R S G A V D V I V V D S V A A L T P K A E I E G E I G D S H M G L A A R M M S Q A M R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T
S S T
S S
G G G
S
S S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K L A G N L K Q S N T L L I F I N Q I R M K I G V M F G N P E T T T G G N A L K F Y A S V R L D I R R I G A V K E G E N V V G S E T R V K V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T
S S
S S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence V K N K I A A P F K Q A E F Q I L Y G E G I N F Y G E L V D L G V K E K L I E K A G A W Y S Y K G E K I G Q G K A N A T A W L K D N P E T A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
S
T T T
T T S S T T T T S T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence K E I E K K V R E L L L A I D E N K Q K A L A A A L G Q I E K Q F G K G S I M R L G E D R S M D V E T I S T G S L S L D I A L G A G G L P M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
T T S G G G
T T T S
S
S S S S T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence G R I V E I Y G P E S S G K T T L T L Q V I A A A Q R E G K T C A F I D A E H A L D P I Y A R K L G V D I D N L L C S Q P D T G E Q A L E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T S S T T T
T T S
T T
T T T
S S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence C D A L A R S G A V D V I V V D S V A A L T P K A E I E G E I G D S H M G L A A R M M S Q A M R K L A G N L K Q S N T L L I F I N Q I R M K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
G G G
S
T T
T T T T T

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence I G V M F G N P E T T T G G N A L K F Y A S V R L D I R R I G A V K E G E N V V G S E T R V K V V K N K I A A P F K Q A E F Q I L Y G E G I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
S S T T S S S
S
T T T

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence N F Y G E L V D L G V K E K L I E K A G A W Y S Y K G E K I G Q G K A N A T A W L K D N P E T A K E I E K K V R E L L L S N P N S A I D E N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S T T T T S T T
S S
S T T

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence K Q K A L A A A L G Q I E K Q F G K G S I M R L G E D R S M D V E T I S T G S L S L D I A L G A G G L P M G R I V E I Y G P E S S G K T T L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S G G G
T T T S
S
S S S S T T S
T T S S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence T L Q V I A A A Q R E G K T C A F I D A E H A L D P I Y A R K L G V D I D N L L C S Q P D T G E Q A L E I C D A L A R S G A V D V I V V D S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T S
T T
T T T
S S T
S S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence V A A L T P K A E I E G E I G D S H M G L A A R M M S Q A M R K L A G N L K Q S N T L L I F I N Q I R M K I G V M F G N P E T T T G G N A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
S
T T
T T T T T
T T
S S
S S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence K F Y A S V R L D I R R I G A V K E G E N V V G S E T R V K V V K N K I A A P F K Q A E F Q I L Y G E G I N F Y G E L V D L G V K E K L I E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S S
S
T T T
T T S S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence K A G A W Y S Y K G E K I G Q G K A N A T A W L K D N P E T A K E I E K K V R E L L L S N P N S A I D E N K Q K A L A A A L G Q I E K Q F G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S T T
S S
S T T

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence K G S I M R L G E D R S M D V E T I S T G S L S L D I A L G A G G L P M G R I V E I Y G P E S S G K T T L T L Q V I A A A Q R E G K T C A F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S G G G
T T T S
S
S S S S T T S
T T S S T T T

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence I D A E H A L D P I Y A R K L G V D I D N L L C S Q P D T G E Q A L E I C D A L A R S G A V D V I V V D S V A A L T P K A E I E G E I G D S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T
T T T
S S T
S S
G G G
S
T T

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence H M G L A A R M M S Q A M R K L A G N L K Q S N T L L I F I N Q I R M K I G V M F G N P E T T T G G N A L K F Y A S V R L D I R R I G A V K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T
T T
S S
S S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence E G E N V V G S E T R V K V V K N K I A A P F K Q A E F Q I L Y G E G I N F Y G E L V D L G V K E K L I E K A G A W Y S Y K G E K I G Q G K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S S
S
T T T
T T S S T T T T S

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence A N A T A W L K D N P E T A K E I E K K V R E L L L S N P N S A I D E N K Q K A L A A A L G Q I E K Q F G K G S I M R L G E D R S M D V E T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S
S T T
T T S G G G
T T T S

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 . . . . . . . . . 1370 . . . . . . . . . 1380 . . . . . . . . . 1390 . . . . . . . . . 1400

Sequence I S T G S L S L D I A L G A G G L P M G R I V E I Y G P E S S G K T T L T L Q V I A A A Q R E G K T C A F I D A E H A L D P I Y A R K L G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S S T T S
T T S S T T T
T T S
T T

. . . . . . . . . 1410 . . . . . . . . . 1420 . . . . . . . . . 1430 . . . . . . . . . 1440 . . . . . . . . . 1450 . . . . . . . . . 1460 . . . . . . . . . 1470

Sequence D I D N L L C S Q P D T G E Q A L E I C D A L A R S G A V D V I V V D S V A A L T P K A E I E G E I G D S H M G L A A R M M S Q A M R K L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S S T
S S
G G G
S
T T
T T

. . . . . . . . . 1480 . . . . . . . . . 1490 . . . . . . . . . 1500 . . . . . . . . . 1510 . . . . . . . . . 1520 . . . . . . . . . 1530 . . . . . . . . . 1540

Sequence G N L K Q S N T L L I F I N Q I R M K I G V M F G N P E T T T G G N A L K F Y A S V R L D I R R I G A V K E G E N V V G S E T R V K V V K N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T
S S
S S T T

. . . . . . . . . 1550 . . . . . . . . . 1560 . . . . . . . . . 1570 . . . . . . . . . 1580 . . . . . . . . . 1590 . . . . . . . . . 1600 . . . . . . . . . 1610

Sequence K I A A P F K Q A E F Q I L Y G E G I N F Y G E L V D L G V K E K L I E K A G A W Y S Y K G E K I G Q G K A N A T A W L K D N P E T A K E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
S
T T T
T T S S T T T T S T T

. . . . . . . . . 1620 . . . . . . . . . 1630 . . . . . . . . . 1640 . . . . . . . . . 1650 . . . . . . . . . 1660 . . . . . . . . . 1670 . . . . . . . . . 1680

Sequence E K K V R E L L L S N P N S A I D E N K Q K A L A A A L G Q I E K Q F G K G S I M R L G E D R S M D V E T I S T G S L S L D I A L G A G G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S T T
T T S G G G
T T T
S
S S S S

. . . . . . . . . 1690 . . . . . . . . . 1700 . . . . . . . . . 1710 . . . . . . . . . 1720 . . . . . . . . . 1730 . . . . . . . . . 1740 . . . . . . . . . 1750

Sequence P M G R I V E I Y G P E S S G K T T L T L Q V I A A A Q R E G K T C A F I D A E H A L D P I Y A R K L G V D I D N L L C S Q P D T G E Q A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T S S T T T
T T S
T T
T T T
S S

. . . . . . . . . 1760 . . . . . . . . . 1770 . . . . . . . . . 1780 . . . . . . . . . 1790 . . . . . . . . . 1800 . . . . . . . . . 1810 . . . . . . . . . 1820

Sequence E I C D A L A R S G A V D V I V V D S V A A L T P K A E I E M G L A A R M M S Q A M R K L A G N L K Q S N T L L I F I N Q I R N P E T T T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
G G G
T T T
S S

. . . . . . . . . 1830 . . . . . . . . . 1840 . . . . . . . . . 1850 . . . . . . . . . 1860 . . . . . . . . . 1870 . . . . . . . . . 1880 . . . . . . . . . 1890

Sequence G N A L K F Y A S V R L D I R R I G A V K E G E N V V G S E T R V K V V K N K I A A P F K Q A E F Q I L Y G E G I N F Y G E L V D L G V K E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S S
S
T T T
T

. . . . . . . . . 1900 . . . . . . . . . 1910 . . . . . . . . . 1920 . . . . . . . . . 1930 . . . . . . .

Sequence K L I E K A G A W Y S Y K G E K I G Q G K A N A T A W L K D N P E T A K E I E K K V R E L L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S T T T T S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	E	T	I	S	T	G	S	L	S	L	D	I	A	L	G	A	G	G	L	P	M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	I	Y	A	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S									S	S	S	S			T	T	S								T	T	S	S														T	T	T								T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	G	V	D	I	D	N	L	L	C	S	Q	P	D	T	G	E	Q	A	L	E	I	C	D	A	L	A	R	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	K	A	E	I	E	G	E	I	G	D	S	H	M	G	L	A	A	R	M	M	S	Q	A	M	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			T	T	T							S	S															T			S					S		G	G	G									S		S	S	S			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	L	A	G	N	L	K	Q	S	N	T	L	L	I	F	I	N	Q	I	R	M	K	I	G	V	M	F	G	N	P	E	T	T	T	G	G	N	A	L	K	F	Y	A	S	V	R	L	D	I	R	R	I	G	A	V	K	E	G	E	N	V	V	G	S	E	T	R	V	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T													T	T			S	S						S	S																							T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	K	N	K	I	A	A	P	F	K	Q	A	E	F	Q	I	L	Y	G	E	G	I	N	F	Y	G	E	L	V	D	L	G	V	K	E	K	L	I	E	K	A	G	A	W	Y	S	Y	K	G	E	K	I	G	Q	G	K	A	N	A	T	A	W	L	K	D	N	P	E	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S		S										T	T	T															T	T	S	S				T	T					T	T						S									T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	E	I	E	K	K	V	R	E	L	L	L	A	I	D	E	N	K	Q	K	A	L	A	A	A	L	G	Q	I	E	K	Q	F	G	K	G	S	I	M	R	L	G	E	D	R	S	M	D	V	E	T	I	S	T	G	S	L	S	L	D	I	A	L	G	A	G	G	L	P	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	T	T																		T	T	S				G	G	G		T	T	T	S							S									S	S	S	S			T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	I	Y	A	R	K	L	G	V	D	I	D	N	L	L	C	S	Q	P	D	T	G	E	Q	A	L	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S								T	T	S	S														T	T	T								T	T	S										T	T			T	T	T							S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	C	D	A	L	A	R	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	K	A	E	I	E	G	E	I	G	D	S	H	M	G	L	A	A	R	M	M	S	Q	A	M	R	K	L	A	G	N	L	K	Q	S	N	T	L	L	I	F	I	N	Q	I	R	M	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T			S					S		G	G	G									S		T	T				T	T																			T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	I	G	V	M	F	G	N	P	E	T	T	T	G	G	N	A	L	K	F	Y	A	S	V	R	L	D	I	R	R	I	G	A	V	K	E	G	E	N	V	V	G	S	E	T	R	V	K	V	V	K	N	K	I	A	A	P	F	K	Q	A	E	F	Q	I	L	Y	G	E	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			S	S						S	S																							T	T															S	S	S		S										T	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	N	F	Y	G	E	L	V	D	L	G	V	K	E	K	L	I	E	K	A	G	A	W	Y	S	Y	K	G	E	K	I	G	Q	G	K	A	N	A	T	A	W	L	K	D	N	P	E	T	A	K	E	I	E	K	K	V	R	E	L	L	L	S	N	P	N	S	A	I	D	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T	S	S				T	T					T	T						S									T	T																		S	S						S	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	K	Q	K	A	L	A	A	A	L	G	Q	I	E	K	Q	F	G	K	G	S	I	M	R	L	G	E	D	R	S	M	D	V	E	T	I	S	T	G	S	L	S	L	D	I	A	L	G	A	G	G	L	P	M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T	S				G	G	G		T	T	T	S							S									S	S	S	S			T	T	S								T	T	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	I	Y	A	R	K	L	G	V	D	I	D	N	L	L	C	S	Q	P	D	T	G	E	Q	A	L	E	I	C	D	A	L	A	R	S	G	A	V	D	V	I	V	V	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T								T	T	S										T	T			T	T	T							S	S															T			S					S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	V	A	A	L	T	P	K	A	E	I	E	G	E	I	G	D	S	H	M	G	L	A	A	R	M	M	S	Q	A	M	R	K	L	A	G	N	L	K	Q	S	N	T	L	L	I	F	I	N	Q	I	R	M	K	I	G	V	M	F	G	N	P	E	T	T	T	G	G	N	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G									S		T	T				T	T																			T	T	T													T	T			S	S						S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	K	F	Y	A	S	V	R	L	D	I	R	R	I	G	A	V	K	E	G	E	N	V	V	G	S	E	T	R	V	K	V	V	K	N	K	I	A	A	P	F	K	Q	A	E	F	Q	I	L	Y	G	E	G	I	N	F	Y	G	E	L	V	D	L	G	V	K	E	K	L	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T															S	S	S		S										T	T	T															T	T	S	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	K	A	G	A	W	Y	S	Y	K	G	E	K	I	G	Q	G	K	A	N	A	T	A	W	L	K	D	N	P	E	T	A	K	E	I	E	K	K	V	R	E	L	L	L	S	N	P	N	S	A	I	D	E	N	K	Q	K	A	L	A	A	A	L	G	Q	I	E	K	Q	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T					T	T						S									T	T																		S	S						S	T	T
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	K	G	S	I	M	R	L	G	E	D	R	S	M	D	V	E	T	I	S	T	G	S	L	S	L	D	I	A	L	G	A	G	G	L	P	M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S				G	G	G		T	T	T	S							S									S	S	S	S			T	T	S								T	T	S	S														T	T	T
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	I	D	A	E	H	A	L	D	P	I	Y	A	R	K	L	G	V	D	I	D	N	L	L	C	S	Q	P	D	T	G	E	Q	A	L	E	I	C	D	A	L	A	R	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	K	A	E	I	E	G	E	I	G	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S										T	T			T	T	T							S	S															T			S					S		G	G	G									S		T	T
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	H	M	G	L	A	A	R	M	M	S	Q	A	M	R	K	L	A	G	N	L	K	Q	S	N	T	L	L	I	F	I	N	Q	I	R	M	K	I	G	V	M	F	G	N	P	E	T	T	T	G	G	N	A	L	K	F	Y	A	S	V	R	L	D	I	R	R	I	G	A	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																			T	T	T													T	T			S	S						S	S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	E	G	E	N	V	V	G	S	E	T	R	V	K	V	V	K	N	K	I	A	A	P	F	K	Q	A	E	F	Q	I	L	Y	G	E	G	I	N	F	Y	G	E	L	V	D	L	G	V	K	E	K	L	I	E	K	A	G	A	W	Y	S	Y	K	G	E	K	I	G	Q	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T															S	S	S		S										T	T	T															T	T	S	S				T	T					T	T						S
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	A	N	A	T	A	W	L	K	D	N	P	E	T	A	K	E	I	E	K	K	V	R	E	L	L	L	S	N	P	N	S	A	I	D	E	N	K	Q	K	A	L	A	A	A	L	G	Q	I	E	K	Q	F	G	K	G	S	I	M	R	L	G	E	D	R	S	M	D	V	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T																		S	S						S	T	T																		T	T	S				G	G	G		T	T	T	S
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400
Sequence	I	S	T	G	S	L	S	L	D	I	A	L	G	A	G	G	L	P	M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	I	Y	A	R	K	L	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S									S	S	S	S			T	T	S								T	T	S	S														T	T	T								T	T	S										T	T
	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470
Sequence	D	I	D	N	L	L	C	S	Q	P	D	T	G	E	Q	A	L	E	I	C	D	A	L	A	R	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	K	A	E	I	E	G	E	I	G	D	S	H	M	G	L	A	A	R	M	M	S	Q	A	M	R	K	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T							S	S															T			S					S		G	G	G									S		T	T				T	T
	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540
Sequence	G	N	L	K	Q	S	N	T	L	L	I	F	I	N	Q	I	R	M	K	I	G	V	M	F	G	N	P	E	T	T	T	G	G	N	A	L	K	F	Y	A	S	V	R	L	D	I	R	R	I	G	A	V	K	E	G	E	N	V	V	G	S	E	T	R	V	K	V	V	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T													T	T			S	S						S	S																							T	T
	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610
Sequence	K	I	A	A	P	F	K	Q	A	E	F	Q	I	L	Y	G	E	G	I	N	F	Y	G	E	L	V	D	L	G	V	K	E	K	L	I	E	K	A	G	A	W	Y	S	Y	K	G	E	K	I	G	Q	G	K	A	N	A	T	A	W	L	K	D	N	P	E	T	A	K	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S		S										T	T	T															T	T	S	S				T	T					T	T						S									T	T
	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680
Sequence	E	K	K	V	R	E	L	L	L	S	N	P	N	S	A	I	D	E	N	K	Q	K	A	L	A	A	A	L	G	Q	I	E	K	Q	F	G	K	G	S	I	M	R	L	G	E	D	R	S	M	D	V	E	T	I	S	T	G	S	L	S	L	D	I	A	L	G	A	G	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S						S	T	T																		T	T	S				G	G	G		T	T	T								S									S	S	S	S
	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.	.	.	.	.	1750
Sequence	P	M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	I	Y	A	R	K	L	G	V	D	I	D	N	L	L	C	S	Q	P	D	T	G	E	Q	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S								T	T	S	S														T	T	T								T	T	S										T	T			T	T	T							S	S
	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820
Sequence	E	I	C	D	A	L	A	R	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	K	A	E	I	E	M	G	L	A	A	R	M	M	S	Q	A	M	R	K	L	A	G	N	L	K	Q	S	N	T	L	L	I	F	I	N	Q	I	R	N	P	E	T	T	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T			S					S		G	G	G																													T	T	T																S	S
	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890
Sequence	G	N	A	L	K	F	Y	A	S	V	R	L	D	I	R	R	I	G	A	V	K	E	G	E	N	V	V	G	S	E	T	R	V	K	V	V	K	N	K	I	A	A	P	F	K	Q	A	E	F	Q	I	L	Y	G	E	G	I	N	F	Y	G	E	L	V	D	L	G	V	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	T															S	S	S		S										T	T	T															T
	.	.	.	.	.	.	.	.	.	1900	.	.	.	.	.	.	.	.	.	1910	.	.	.	.	.	.	.	.	.	1920	.	.	.	.	.	.	.	.	.	1930	.	.	.	.	.	.	.
Sequence	K	L	I	E	K	A	G	A	W	Y	S	Y	K	G	E	K	I	G	Q	G	K	A	N	A	T	A	W	L	K	D	N	P	E	T	A	K	E	I	E	K	K	V	R	E	L	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S				T	T					T	T						S									T	T