Fold library entry viewer: c3ciaA_

Added to library: Tue Mar 16 12:43:19 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	T	D	A	Y	T	Y	A	N	Y	D	Q	V	K	A	T	H	V	Y	L	D	L	N	V	D	F	D	K	K	S	L	S	G	F	A	E	L	S	L	D	W	F	T	D	N	K	A	P	L	I	L	D	T	R	D	L	V	I	H	R	V	M	A	K	N	S	Q	G	Q	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S					T	T	T														T	T	T	T															S	S							B		S	S											T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	K	V	N	Y	D	L	A	K	R	D	D	V	L	G	S	K	L	T	I	N	T	P	L	N	A	K	K	V	R	V	Y	Y	N	S	T	E	K	A	T	G	L	Q	W	L	S	A	E	Q	T	A	G	K	E	K	P	F	L	F	S	Q	N	Q	A	I	H	A	R	S	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S	S										T	T		S										T	T		T	T						G	G	G	S	S	S	S	S	S								T	T	T	T	G	G	G	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	P	I	Q	D	T	P	S	V	R	V	T	Y	T	A	R	I	T	T	D	K	D	L	L	A	V	M	S	A	N	N	E	R	D	G	D	Y	F	F	S	M	P	Q	A	I	P	P	Y	L	I	A	I	G	V	G	D	L	E	F	K	A	M	S	H	Q	T	G	I	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		B				T	T													T	T						S	S						S												G	G	G							S						S	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	S	Y	I	L	D	A	A	V	A	E	F	D	D	T	Q	A	M	I	D	K	A	E	Q	M	Y	G	K	Y	R	W	G	R	Y	D	L	L	M	L	P	P	S	F	P	F	G	G	M	E	N	P	R	L	S	F	I	T	P	T	V	V	A	G	D	K	S	L	V	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	T	T								S	T	T																T	T	S									T	T		S	S	S					T	T						G	G	G			S	S	S		S	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	A	H	E	L	A	H	S	W	S	G	N	L	V	T	N	E	S	W	R	D	L	W	L	N	E	G	F	T	S	Y	V	E	N	R	I	M	E	A	V	F	G	T	D	R	A	V	M	E	Q	A	L	G	A	Q	D	L	N	A	E	I	L	E	L	D	A	S	D	T	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	B	T	T	T				S	S	T	T	S	T																																										S		T	T	T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	Y	I	D	L	K	G	R	D	P	D	D	A	F	S	G	V	P	Y	V	K	G	Q	L	F	L	M	Y	L	E	E	K	F	G	R	E	R	F	D	A	F	V	L	E	Y	F	D	S	H	A	F	Q	S	L	G	T	D	N	F	V	K	Y	L	K	A	N	L	T	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S				T	T			T	T	T	S			S																																	T	T	T															T	T	T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Y	P	N	I	V	S	D	N	E	I	N	E	W	I	F	K	A	G	L	P	S	Y	A	P	Q	P	T	S	N	A	F	K	V	I	D	K	Q	I	N	Q	L	V	T	D	E	L	T	L	E	Q	L	P	T	A	Q	W	T	L	H	E	W	L	H	F	I	N	N	L	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T	S	S											S	S	S			S	S	S															T			T	T	T	T	S	S			S		S	G	G	G	G			S										S		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	L	D	H	Q	M	V	N	L	D	K	A	F	D	L	T	N	S	S	N	A	E	I	A	H	A	W	Y	L	L	S	V	R	A	D	Y	K	E	V	Y	P	A	M	A	K	Y	L	K	S	I	G	R	R	K	L	I	V	P	L	Y	K	E	L	A	K	N	A	E	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T												S	S		S	S															T		G	G	G														S	T	T	T								T	T	S	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Sequence	A	W	A	V	E	V	Y	K	Q	A	R	P	G	Y	H	G	L	A	Q	G	T	V	D	G	V	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S	T	T	T	S											T	T

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PDB structure

FASTA sequence

Hidden Markov model

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