PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3cgvA_

Fold library id	PDB Header	Molecule	Title
c3cgvA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: geranylgeranyl reductase related protein;	PDBTitle: crystal structure of geranylgeranyl bacteriochlorophyll2 reductase-like fixc homolog (np_393992.1) from3 thermoplasma acidophilum at 1.60 a resolution

Links to external resources
Added to library: Tue Mar 16 11:57:12 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G X E T Y D V L V V G G G P G G S T A A R Y A A K Y G L K T L X I E K R P E I G S P V R C G E G L S K G I L N E A D I K A D R S F I A N E V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
S S S S T T
S
S
T T T
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K G A R I Y G P S E K R P I I L Q N E V G Y V L E R D K F D K H L A A L A A K A G A D V W V K S P A L G V I K E N G K V A G A K I R H N N E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
S S
T
S S
T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I V D V R A K X V I A A D G F E S E F G R W A G L K S V I L A R N D I I S A L Q Y R X I N V D V D P D Y T D F Y L G S I A P A G Y I W V F P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T
T T
G G G S
T T
S T T S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence K G E G X A N V G I G S S I N W I H N R F E L K N Y L D R F I E N H P G L K K G Q D I Q L V T G G V S V S K V K X P I T X P G L X L V G D A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T
S
T
T S
S
T T
G G G

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence A R L I D P I T G G G I A N A I V S G X Y A A Q V T K E A I E S N D Y S P Q X X Q K Y E K L I K E R F E R K H L R N W V A K E K L A X L S D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G T
S
T T T
T
S T T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . .

Sequence D T L D K L V D I V S E Q V L T T I S V E A I L K A I A E K Y P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
B
S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	X	E	T	Y	D	V	L	V	V	G	G	G	P	G	G	S	T	A	A	R	Y	A	A	K	Y	G	L	K	T	L	X	I	E	K	R	P	E	I	G	S	P	V	R	C	G	E	G	L	S	K	G	I	L	N	E	A	D	I	K	A	D	R	S	F	I	A	N	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S													T	T								S	S	S	S	T	T		S			S						T						T	T					T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	G	A	R	I	Y	G	P	S	E	K	R	P	I	I	L	Q	N	E	V	G	Y	V	L	E	R	D	K	F	D	K	H	L	A	A	L	A	A	K	A	G	A	D	V	W	V	K	S	P	A	L	G	V	I	K	E	N	G	K	V	A	G	A	K	I	R	H	N	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							T	T		S	S																													T					S	S										T	T										T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	V	D	V	R	A	K	X	V	I	A	A	D	G	F	E	S	E	F	G	R	W	A	G	L	K	S	V	I	L	A	R	N	D	I	I	S	A	L	Q	Y	R	X	I	N	V	D	V	D	P	D	Y	T	D	F	Y	L	G	S	I	A	P	A	G	Y	I	W	V	F	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T								T			T	T				G	G	G											S					T	T							S	T	T	S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	K	G	E	G	X	A	N	V	G	I	G	S	S	I	N	W	I	H	N	R	F	E	L	K	N	Y	L	D	R	F	I	E	N	H	P	G	L	K	K	G	Q	D	I	Q	L	V	T	G	G	V	S	V	S	K	V	K	X	P	I	T	X	P	G	L	X	L	V	G	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T										T	T	T		S															T						T	S																	S					T	T					G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	R	L	I	D	P	I	T	G	G	G	I	A	N	A	I	V	S	G	X	Y	A	A	Q	V	T	K	E	A	I	E	S	N	D	Y	S	P	Q	X	X	Q	K	Y	E	K	L	I	K	E	R	F	E	R	K	H	L	R	N	W	V	A	K	E	K	L	A	X	L	S	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	T		S		T	T	T																									T			S																														T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Sequence	D	T	L	D	K	L	V	D	I	V	S	E	Q	V	L	T	T	I	S	V	E	A	I	L	K	A	I	A	E	K	Y	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S		B		S		S