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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3cesB_

Fold library idPDB HeaderMoleculeTitle
c3cesB_PDB header: rna binding proteinChain: B: PDB Molecule: trna uridine 5-carboxymethylaminomethylPDBTitle: crystal structure of e.coli mnmg (gida), a highly-conserved2 trna modifying enzyme


Added to library: Tue Mar 16 12:28:47 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HMFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGL
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Known secondary structure (DSSP)

SS

S

STT

S
GGGTT

SS
S
TTTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence MAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAV
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Known secondary structure (DSSP) STTS
TTS

T
TT

SSSB
 .........150.........160.........170.........180.........190.........200.........210
Sequence TQMGLKFRAKAVVLTVGTFLDGKIHIGSIPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDN
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Known secondary structure (DSSP) TTS
S

SGGG





TT



GGGS
GGGS


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence PMPVFSFMGNASQHPQQVPCYITHTNEKTHDVIRSNLSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNG
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Known secondary structure (DSSP) S


SSTT

GGGS









TTTS
TT


S
TT

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence ISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLFFAGQINGTTGYEEAA
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Known secondary structure (DSSP)


S

TSTT
TT




GGGB
TTSBBSSSBT
GGGGT


 .........360.........370.........380.........390.........400.........410.........420
Sequence AQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTEI
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Known secondary structure (DSSP) TT






TTT
SS


GGGTTTSS

GGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence GRELGLVDDERWARFNEKLENIERERQRLKSTWVTPSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYE
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Known secondary structure (DSSP) T


TTTS

SSSTTSSS


S
TTSSSSSTT

 .........500.........510.........
Sequence KLTTLTPFAPALTDEQAAEQVEIQVKYEG
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Known secondary structure (DSSP) TTSGGG



S
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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