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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c3cdiA_

Fold library idPDB HeaderMoleculeTitle
c3cdiA_PDB header: transferaseChain: A: PDB Molecule: polynucleotide phosphorylase;PDBTitle: crystal structure of e. coli pnpase


Added to library: Tue Mar 16 12:52:36 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAG
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Known secondary structure (DSSP)


TTSSS
TTSSTT
SS

SS

S


GGGGT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RIPGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGP
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Known secondary structure (DSSP)






GGGS
TT

S


TTS
TSS



 .........150.........160.........170.........180.........190.........200.........210
Sequence IGAARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAQLLSEDQMLGAVVFGHEQQQVVIQN
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Known secondary structure (DSSP)


TTS

TTGGGG
S
SS

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence INELVKEAGKPRWDWQPEPVNEALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIATLLAEDETL
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Known secondary structure (DSSP) T












TTGGGSSTTTTTT


S


 .........290.........300.........310.........320.........330.........340.........350
Sequence DENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGT
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Known secondary structure (DSSP)
TT


TTS

TT



S
STTSSTT

 .........360.........370.........380.........390.........400.........410.........420
Sequence RTDTFLFHYNFPPYSVGETGMVREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGA
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Known secondary structure (DSSP)
TTS

GGGGT





TTTTS

SSSS
S

SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence SLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITK
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Known secondary structure (DSSP) TT


SS

TTSS

GGGGGG
S
SS

SS


 .........500.........510......
Sequence EIMQVALNQAKGARLHILGVMEQAIN
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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