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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Fold library id | PDB Header | Molecule | Title |
|---|---|---|---|
| c3cbbA_ | PDB header: transcription/dna | Chain: A: PDB Molecule: hepatocyte nuclear factor 4-alpha, dna binding | PDBTitle: crystal structure of hepatocyte nuclear factor 4alpha in2 complex with dna: diabetes gene product |
| Added to library: Tue Mar 16 13:08:39 2010 | |
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| Links to external resources | |
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|   | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
| Sequence | A | L | C | A | I | C | G | D | R | A | T | G | K | H | Y | G | A | S | S | C | D | G | C | K | G | F | F | R | R | S | V | R | K | N | H | M | Y | S | C | R | F | S | R | Q | C | V | V | D | K | D | K | R | N | Q | C | R | Y | C | R | L | K | K | C | F | R | A | G | M | K | K |
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | B | T | T | T | S | S | B | S | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S | S | S | T | T | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | G |   | . | . | . | . | . | . | ||||||||||||
| Sequence | E | A | V | Q | N | E | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | G | G |
| Download: | PDB structure | FASTA sequence |
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